RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 NCCRP1Q6ZVX7 275 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 GLT6D1Q7Z4J2 308 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SIDT2Q8NBJ9 832 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 MINDY2Q8NBR6 621 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PIK3C3Q8NEB9 887 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ZNF548Q8NEK5 533 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CD200R1Q8TD46 325 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 EEF1AKMT1Q8WVE0 214 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 KCNJ9Q92806 393 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 POP5Q969H6 163 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ESAMQ96AP7 390 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SLC47A1Q96FL8 570 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 VMP1Q96GC9 406 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CDK15Q96Q40 435 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 C17orf80Q9BSJ5 609 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 WDR12Q9GZL7 423 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CARS2Q9HA77 564 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SMURF2Q9HAU4 748 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 IL37Q9NZH6 218 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 VAPAQ9P0L0 249 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ADGRE2Q9UHX3 823 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ASB1Q9Y576 335 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PCDHGB1Q9Y5G3 927 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 TNPO3Q9Y5L0 923 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CPQQ9Y646 472 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 LOC100130705A0A1B0GUX0 176 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ADAM23O75077 832 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 NIPSNAP2O75323 286 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SCELO95171 688 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ALDH2P05091 517 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CCDC159P0C7I6 412 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 MSH3P20585 1137 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PCMT1P22061 227 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 RYKP34925 604 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PIGAP37287 484 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 DGKQP52824 942 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CD47Q08722 323 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 KCNAB2Q13303 367 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 NR6A1Q15406 480 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CTF1Q16619 201 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SMU1Q2TAY7 513 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 AP5B1Q2VPB7 878 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CTU2Q2VPK5 515 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ZC3H12BQ5HYM0 836 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 HABP4Q5JVS0 413 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CTSL3PQ5NE16 218 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ZNF691Q5VV52 312 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ENPP6Q6UWR7 440 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ZBTB46Q86UZ6 589 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 CIR1Q86X95 450 aaPredicted RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ADHFE1Q8IWW8 467 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 EID3Q8N140 333 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 TMCO5AQ8N6Q1 288 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 FAM86B1Q8N7N1 296 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 MDGA1Q8NFP4 955 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 OR5K1Q8NHB7 308 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SLC13A3Q8WWT9 602 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 S100ZQ8WXG8 99 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 FIG4Q92562 907 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SGCDQ92629 289 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ZNF566Q969W8 418 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PDLIM5Q96HC4 596 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PPP3R2Q96LZ3 170 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 PSKH2Q96QS6 385 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 NODALQ96S42 347 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SH3GL1Q99961 368 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 MAGIXQ9H6Y5 334 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ACTR8Q9H981 624 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 TRNAU1APQ9NX07 287 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 ITGB1BP2Q9UKP3 347 aa9.73□□□□□ -0.85
SMARCD1-205ENST00000548573 SLC1A7O00341 560 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 OR7A17O14581 309 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 GNGT2O14610 69 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 SLC16A6O15403 523 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 DFNA5O60443 496 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 OAZ2O95190 189 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 RPLP2P05387 115 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 RETP07949 1114 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 IL1RNP18510 177 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 LPOP22079 712 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 AKT1P31749 480 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 IDUAP35475 653 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 CDKN1CP49918 316 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 HTR6P50406 440 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 RPS3AP61247 264 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 RING1Q06587 406 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 CYP4F3Q08477 520 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 DSC3Q14574 896 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 NKG7Q16617 165 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 CYP2A13Q16696 494 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 DDR2Q16832 855 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 RFX4Q33E94 735 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 RFTN2Q52LD8 501 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 SDHAF4Q5VUM1 108 aa9.72□□□□□ -0.85
SMARCD1-205ENST00000548573 PSAPL1Q6NUJ1 521 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 460.1 ms