RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CLEC20AQ6ZU45 233 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TUBA1AQ71U36 451 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SLC46A3Q7Z3Q1 461 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 PIM3Q86V86 326 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 CYP4Z1Q86W10 505 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 HIPK1Q86Z02 1210 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MSRB3Q8IXL7 192 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ABI1Q8IZP0 508 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 BEND7Q8N7W2 519 aaPredicted RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ASCC1Q8N9N2 400 aaKnown RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SETD9Q8NE22 299 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ZMIZ2Q8NF64 920 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 PSMA8Q8TAA3 256 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 RASSF5Q8WWW0 418 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 HTRA1Q92743 480 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 KIAA1191Q96A73 305 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SLC47A1Q96FL8 570 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MED30Q96HR3 178 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 CELF6Q96J87 481 aaKnown RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 AARSD1Q9BTE6 412 aaKnown RBP6.83□□□□□ -1.32
CPSF7-215ENST00000536145 CDADC1Q9BWV3 514 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ASPSCR1Q9BZE9 553 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SLC39A8Q9C0K1 460 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 CLPBQ9H078 707 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 DCSTAMPQ9H295 470 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ACTR8Q9H981 624 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SPC25Q9HBM1 224 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ABCB10Q9NRK6 738 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 FKBP14Q9NWM8 211 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 SNTG2Q9NY99 539 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 COX16Q9P0S2 106 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 TBC1D14Q9P2M4 693 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 GRIP1Q9Y3R0 1128 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 ANGPTL3Q9Y5C1 460 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 MAU2Q9Y6X3 613 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 V9GYQ6 96 aa6.83□□□□□ -1.32
CPSF7-215ENST00000536145 YJEFN3A6XGL0 299 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 WASH4PA8MWX3 477 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 EFCAB9A8MZ26 197 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 FAM220BPB1ANY3 271 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PTGES3LE9PB15 166 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CLDN5O00501 218 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MUSKO15146 869 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ZW10O43264 779 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RGS10O43665 173 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 DFNA5O60443 496 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 WBP4O75554 376 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 FKBP9O95302 570 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 DLGAP3O95886 979 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 F9P00740 461 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CST1P01037 141 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SEMG1P04279 462 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 LCKP06239 509 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RETP07949 1114 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MMP2P08253 660 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 UROSP10746 265 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PCNAP12004 261 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 INSRRP14616 1297 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CD36P16671 472 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF37AP17032 561 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 HOXB6P17509 224 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PRKACGP22612 351 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PSMA3P25788 255 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 GTF2E2P29084 291 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PRDX3P30048 256 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 HOXA9P31269 272 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 HOXA11P31270 313 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CYP2C18P33260 490 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 GRK5P34947 590 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 HTR7P34969 479 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PIK3CBP42338 1070 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ST13P50502 369 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 HMGCS2P54868 508 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 TPD52P55327 224 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 P2RX3P56373 397 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MTPNP58546 118 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 COPZ1P61923 177 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RACK1P63244 317 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CCNA1P78396 465 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 LAPTM5Q13571 262 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 GPR50Q13585 617 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 KRR1Q13601 381 aaKnown RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SEMA3AQ14563 771 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MAD2L1BPQ15013 274 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PON2Q15165 354 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CARTPTQ16568 116 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PLEKHG6Q3KR16 790 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CCDC58Q4VC31 144 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RUNDC3AQ59EK9 446 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CARD16Q5EG05 197 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 PRSS36Q5K4E3 855 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 MLIPQ5VWP3 458 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RSBN1Q5VWQ0 802 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ANKS6Q68DC2 871 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 ZNF544Q6NX49 715 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 SPESP1Q6UW49 350 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 RNF19BQ6ZMZ0 732 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CCDC190Q86UF4 302 aa6.82□□□□□ -1.32
CPSF7-215ENST00000536145 CCDC71Q8IV32 467 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms