RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RELL1Q8IUW5 271 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 GABPB2Q8TAK5 448 aaPredicted RBP11.82□□□□□ -0.52
CHD4-203ENST00000535717 IFI44Q8TCB0 444 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 MAPK15Q8TD08 544 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 ELMO1Q92556 727 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 WWP1Q9H0M0 922 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 TSPYL1Q9H0U9 437 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 COG4Q9H9E3 785 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 SMYD2Q9NRG4 433 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 EVA1BQ9NVM1 165 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 ZNF624Q9P2J8 865 aaPredicted RBP11.82□□□□□ -0.52
CHD4-203ENST00000535717 LRIT1Q9P2V4 623 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 PCDHB1Q9Y5F3 818 aa11.82□□□□□ -0.52
CHD4-203ENST00000535717 TCRBV9S1A1TA0A576 114 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 SLC5A10A0PJK1 596 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 OR5K4A6NMS3 321 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 OR52A4PA6NMU1 304 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 H3BMM5 538 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 LIN7AO14910 233 aaPredicted RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 PPM1DO15297 605 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 NUDT21O43809 227 aaKnown RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 NIPSNAP2O75323 286 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 RFPL3O75679 317 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 PIAS1O75925 651 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 DKK1O94907 266 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 C1QAP02745 245 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 AHSGP02765 367 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 PKMP14618 531 aaKnown RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 GLB1P16278 677 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 AOAHP28039 575 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 PDHA2P29803 388 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 SLC19A1P41440 591 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 ABCG1P45844 678 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 FASLGP48023 281 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 UBE2IP63279 158 aaKnown RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 RPA4Q13156 261 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 ILKQ13418 452 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 BOP1Q14137 746 aaKnown RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 BRD3Q15059 726 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 KYNUQ16719 465 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 UBAP2Q5T6F2 1119 aaKnown RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 CYS1Q717R9 158 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 GALNT7Q86SF2 657 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 OR6C4Q8NGE1 309 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 NAT6Q93015 286 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 CCDC74AQ96AQ1 378 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 RMDN2Q96LZ7 410 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 TSSK1BQ9BXA7 367 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 OR52A5Q9H2C5 316 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 ANKZF1Q9H8Y5 726 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 NINJ2Q9NZG7 142 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 ZFATQ9P243 1243 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 GALPQ9UBC7 116 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 CPNE7Q9UBL6 633 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 APOBEC2Q9Y235 224 aaKnown RBP11.81□□□□□ -0.52
CHD4-203ENST00000535717 PCDHGA1Q9Y5H4 931 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 PSAT1Q9Y617 370 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 RP1P56715 2156 aa11.81□□□□□ -0.52
CHD4-203ENST00000535717 PRAMEF33A0A0G2JMD5 474 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 FAM159BA6NKW6 160 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 RHPN2P1A8MT19 583 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 CXorf49A8MYA2 514 aaPredicted RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 CASC3O15234 703 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 GPC4O75487 556 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 GP1BAP07359 652 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 FAM153BP0C7A2 387 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 SLC35G4P0C7Q5 338 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 XRCC1P18887 633 aaPredicted RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 HALP42357 657 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 CSE1LP55060 971 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 TUBB4BP68371 445 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 HHEXQ03014 270 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 RPE65Q16518 533 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 FAM153CQ494X1 144 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 SYTL3Q4VX76 610 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 CAPRIN2Q6IMN6 1127 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 ZNF449Q6P9G9 518 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 DGLUCYQ7Z3D6 616 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 ZNF438Q7Z4V0 828 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 SLC9B2Q86UD5 537 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 FBF1Q8TES7 1133 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 FAM136AQ96C01 138 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 PANX3Q96QZ0 392 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 INSM2Q96T92 566 aaPredicted RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 CCDC3Q9BQI4 270 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 AARSD1Q9BTE6 412 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 CDC42EP4Q9H3Q1 356 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 SARS2Q9NP81 518 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 CDYLQ9Y232 598 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 MED16Q9Y2X0 877 aa11.8□□□□□ -0.52
CHD4-203ENST00000535717 CFAP20Q9Y6A4 193 aaKnown RBP11.8□□□□□ -0.52
CHD4-203ENST00000535717 OPA1O60313 960 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 SPAG6O75602 509 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 APOA4P06727 396 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 MYBL2P10244 700 aa11.79□□□□□ -0.52
CHD4-203ENST00000535717 MTHFD1P11586 935 aaKnown RBP11.79□□□□□ -0.52
CHD4-203ENST00000535717 PNLIPP16233 465 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms