RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RNF31Q96EP0 1072 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ZC3HAV1LQ96H79 300 aaKnown RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 VPS39Q96JC1 886 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 HYLS1Q96M11 299 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SPATA13Q96N96 652 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 FCRL3Q96P31 734 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TRMOQ9BU70 441 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 HDHD5Q9BXW7 423 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 GABARAPL1Q9H0R8 117 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TMEM245Q9H330 911 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 PNMA8BQ9ULN7 279 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 U3KQ87 197 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 B4DXG7 233 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CELF2O95319 508 aaKnown RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 RPLP0P05388 317 aaKnown RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 IFI30P13284 250 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ARSAP15289 507 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 MYL9P24844 172 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 RAB25P57735 213 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ERVK-21P61565 698 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 DBPQ10586 325 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 FAM98BQ52LJ0 330 aaKnown RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ARMCX4Q5H9R4 360 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ATF7IP2Q5U623 682 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CACHD1Q5VU97 1274 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 KIAA0319Q5VV43 1072 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 BLOC1S3Q6QNY0 202 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 NAT16Q8N8M0 369 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 OR5B17Q8NGF7 314 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 FBXW5Q969U6 566 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 DACT3Q96B18 629 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CPB2Q96IY4 423 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 KLHL15Q96M94 604 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 RNF145Q96MT1 663 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 FRMD6Q96NE9 622 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CCDC115Q96NT0 180 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ACOX2Q99424 681 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 RNF121Q9H920 327 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CAB39LQ9H9S4 337 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TNFRSF12AQ9NP84 129 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ENTPD7Q9NQZ7 604 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SDR39U1Q9NRG7 319 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 COL2A1P02458 1487 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CCDC182A6NF36 153 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 E9PQ18 207 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 DPYSL4O14531 572 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TSPAN4O14817 238 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 BCKDKO14874 412 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MDM4O15151 490 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 XPNPEP2O43895 674 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 EEDO75530 441 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ASS1P00966 412 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CST3P01034 146 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PRKCBP05771 671 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CYP2C8P10632 490 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SLC2A3P11169 496 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MSH3P20585 1137 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ZP3P21754 424 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 MTHFRP42898 656 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 HOXA1P49639 335 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 EVA1CP58658 441 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 NFIAQ12857 509 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ORC1Q13415 861 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TAB1Q15750 504 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TBCEQ15813 527 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 FBXO43Q4G163 708 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ARMC4Q5T2S8 1044 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 GALNT10Q86SR1 603 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RBFAQ8N0V3 343 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CPA6Q8N4T0 437 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TRPM4Q8TD43 1214 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ASB15Q8WXK1 588 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 POP5Q969H6 163 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 NXPE3Q969Y0 559 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RSPH9Q9H1X1 276 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 AGO4Q9HCK5 861 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 IFT46Q9NQC8 304 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 WDR70Q9NW82 654 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TNPO3Q9Y5L0 923 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 V9GYH0 126 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 PHIPQ8WWQ0 1821 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RPS10-NUDT3A0A1W2PQS6 291 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 E2F8A0AVK6 867 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 AKR7A2O43488 359 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RRASP10301 218 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 NPR3P17342 541 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ATF3P18847 181 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 RAB3AP20336 220 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 SOX6P35712 828 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 LIPAP38571 399 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 ASPAP45381 313 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TPMTP51580 245 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 KPNA2P52292 529 aaKnown RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CD83Q01151 205 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 EMX2Q04743 252 aa8.01□□□□□ -1.13
CSDE1-214ENST00000530886 DMP1Q13316 513 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 TRIP4Q15650 581 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-214ENST00000530886 CRY2Q49AN0 593 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms