RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 PFDN6O15212 129 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 GPC4O75487 556 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 CKMT2P17540 419 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 AOAHP28039 575 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 PDHA2P29803 388 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 FASLGP48023 281 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 PREPP48147 710 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 NOVA1P51513 510 aaKnown RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 VSNL1P62760 191 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 TUBB4BP68371 445 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 RPA4Q13156 261 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 GBX1Q14549 363 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 PUM1Q14671 1186 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 SEPT7Q16181 437 aaKnown RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 PTRHD1Q6GMV3 140 aaKnown RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 NAPRTQ6XQN6 538 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 SLC26A11Q86WA9 606 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 SPNS2Q8IVW8 549 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 CFAP206Q8IYR0 622 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 ARL14Q8N4G2 192 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 GIMAP7Q8NHV1 300 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 ELMO1Q92556 727 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 AARSD1Q9BTE6 412 aaKnown RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 ZNF624Q9P2J8 865 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-204ENST00000527149 GALPQ9UBC7 116 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 RABGEF1Q9UJ41 708 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 KNTC1P50748 2209 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 UNC13CQ8NB66 2214 aa16.3■□□□□ 0.2
SMCO4-204ENST00000527149 KIR2DS5A0A0G2JLQ3 304 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 A0A0G2JNG1 304 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 OR52A4PA6NMU1 304 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 F8W8V4 182 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 H3BMM5 538 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 KIR2DS3K7RE56 304 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 LIN7AO14910 233 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 STX2P32856 288 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 SLC19A1P41440 591 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 CD151P48509 253 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 BOP1Q14137 746 aaKnown RBP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 KIR2DS5Q14953 304 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 NR1D2Q14995 579 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 EFTUD2Q15029 972 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 KBTBD12Q3ZCT8 623 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 PERM1Q5SV97 790 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 RBM20Q5T481 1227 aaKnown RBP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 VRK3Q8IV63 474 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 GABPB2Q8TAK5 448 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 FBF1Q8TES7 1133 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 KCNJ9Q92806 393 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 PANX3Q96QZ0 392 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 SLC30A3Q99726 388 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 WWP1Q9H0M0 922 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 EPB41L4BQ9H329 900 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 SARS2Q9NP81 518 aaKnown RBP16.29■□□□□ 0.2
SMCO4-204ENST00000527149 PADI4Q9UM07 663 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 PSMD13Q9UNM6 376 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
SMCO4-204ENST00000527149 OR5K4A6NMS3 321 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 CASC3O15234 703 aaKnown RBP16.28■□□□□ 0.2
SMCO4-204ENST00000527149 NUDT21O43809 227 aaKnown RBP16.28■□□□□ 0.2
SMCO4-204ENST00000527149 TRIM16O95361 564 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 GLB1P16278 677 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 RPIAP49247 311 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 CLCN7P51798 805 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 DAB2P98082 770 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 SLMAPQ14BN4 828 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 RPE65Q16518 533 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 ERCC6LQ2NKX8 1250 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 WDR93Q6P2C0 686 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 EFL1Q7Z2Z2 1120 aaKnown RBP16.28■□□□□ 0.2
SMCO4-204ENST00000527149 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 PDZD3Q86UT5 571 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 ZC3HC1Q86WB0 502 aaKnown RBP16.28■□□□□ 0.2
SMCO4-204ENST00000527149 SLC22A15Q8IZD6 547 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 MAPK15Q8TD08 544 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 GLMNQ92990 594 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 NAT6Q93015 286 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 CCDC74AQ96AQ1 378 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 FAM136AQ96C01 138 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 INSM2Q96T92 566 aaPredicted RBP16.28■□□□□ 0.2
SMCO4-204ENST00000527149 NDNQ99608 321 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 LATS2Q9NRM7 1088 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 CPNE7Q9UBL6 633 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 CORO1CQ9ULV4 474 aaPredicted RBP16.28■□□□□ 0.2
SMCO4-204ENST00000527149 COMMD10Q9Y6G5 202 aa16.28■□□□□ 0.2
SMCO4-204ENST00000527149 TRBV23OR9-2A0A075B6M9 112 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 PRAMEF33A0A0G2JMD5 474 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 PPM1DO15297 605 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 SLCO2B1O94956 709 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 ACSL3O95573 720 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 GP1BAP07359 652 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 SLC35G4P0C7Q5 338 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 FTH1P19P0C7X4 201 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 MTHFD1P11586 935 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms