RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 TRIB3Q96RU7 358 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 CEP41Q9BYV8 373 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 GPR63Q9BZJ6 419 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 RAB33BQ9H082 229 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 AKIRIN1Q9H9L7 192 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 MAGEE1Q9HCI5 957 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 RAD18Q9NS91 495 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 NFKBIL1Q9UBC1 381 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 EPHA6Q9UF33 1036 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 WDR37Q9Y2I8 494 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZNF711Q9Y462 761 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 HEY1Q9Y5J3 304 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZGRF1Q86YA3 2104 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 STK10O94804 968 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 FOLR1P15328 257 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 VCLP18206 1134 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 CASQ1P31415 396 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 PGDP52209 483 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 IFI35P80217 286 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 PPIDQ08752 370 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 AP1B1Q10567 949 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 CHAF1BQ13112 559 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 IL10RAQ13651 578 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 UGT8Q16880 541 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 NADK2Q4G0N4 442 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 WASH2PQ6VEQ5 465 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 CERS6Q6ZMG9 384 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 C11orf96Q7Z7L8 435 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 TRAPPC5Q8IUR0 188 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 CDKL3Q8IVW4 592 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 RBM12BQ8IXT5 1001 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 SIDT2Q8NBJ9 832 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 GPR150Q8NGU9 434 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 SEC14L1Q92503 715 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 UBXN4Q92575 508 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 IMP4Q96G21 291 aaKnown RBP9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC41A2Q96JW4 573 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 OSBPL9Q96SU4 736 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC25A23Q9BV35 468 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 HEMGNQ9BXL5 484 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 WASH6PQ9NQA3 447 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 RNF14Q9UBS8 474 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 TMPRSS11EQ9UL52 423 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 SNX12Q9UMY4 172 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 SVILO95425 2214 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 PCM1Q15154 2024 aa9.37□□□□□ -0.91
TRAPPC4-206ENST00000525303 PCSK5Q92824 1860 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 DOPEY1Q5JWR5 2465 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 GOLGA6L10A0A0M3HER8 536 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 ARGFXA6NJG6 315 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 PGRMC1O00264 195 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 AURKAO14965 403 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 CEP104O60308 925 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SEMA7AO75326 666 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 EBLN1P0CF75 366 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 RNF224P0DH78 156 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 PTPN4P29074 926 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 HALP42357 657 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 ARL4DP49703 201 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 CCL11P51671 97 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 RPS15P62841 145 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 ACY1Q03154 408 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 TMEM115Q12893 351 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 KLF1Q13351 362 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 GTF2H3Q13889 308 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 NOMO1Q15155 1222 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 ATP13A5Q4VNC0 1218 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SYVN1Q86TM6 617 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC13A5Q86YT5 568 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 GDAP1Q8TB36 358 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SSC4DQ8WTU2 575 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 TFB1MQ8WVM0 346 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 THAP4Q8WY91 577 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZNF514Q96K75 400 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 AGAP3Q96P47 875 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 OLFM3Q96PB7 478 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 FCRL4Q96PJ5 515 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 VPS35Q96QK1 796 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 VAT1Q99536 393 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 MAP3K3Q99759 626 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 GPR87Q9BY21 358 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 BPIFA1Q9NP55 256 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 MLXIPLQ9NP71 852 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 ACSS2Q9NR19 701 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 FGF21Q9NSA1 209 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SEMA5BQ9P283 1151 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 PSMD13Q9UNM6 376 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SPO11Q9Y5K1 396 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 SAR1BQ9Y6B6 198 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 LRBAP50851 2863 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 CNTRLQ7Z7A1 2325 aa9.36□□□□□ -0.91
TRAPPC4-206ENST00000525303 H7C0C1 242 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 SORBS2O94875 1100 aaKnown RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 MT-CYBP00156 380 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 FGGP02679 453 aa9.35□□□□□ -0.91
TRAPPC4-206ENST00000525303 PAFAH1B1P43034 410 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms