RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PLPP2O43688 288 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 BAG2O95816 211 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 PENKP01210 267 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 KELP23276 732 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 TCF7P36402 384 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 NPY4RP50391 375 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 BMXP51813 675 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF75DP51815 510 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CAPZA1P52907 286 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 SCN1BQ07699 218 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 PPIGQ13427 754 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF273Q14593 569 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 PTGR1Q14914 329 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CDC37Q16543 378 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 DECR1Q16698 335 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 MYLK3Q32MK0 819 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 Q4G0T1 1027 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ATP13A5Q4VNC0 1218 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ODF2Q5BJF6 829 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 FSCBQ5H9T9 825 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 LCN10Q6JVE6 187 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 TEX38Q6PEX7 206 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC36A4Q6YBV0 504 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 Q6ZSV7 163 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 Q6ZTK2 550 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CTU1Q7Z7A3 348 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CENPVQ7Z7K6 275 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ADGRG3Q86Y34 549 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 TMEM199Q8N511 208 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ARFGAP1Q8N6T3 406 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 EMC1Q8N766 993 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 C7orf57Q8NEG2 295 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 EXD1Q8NHP7 514 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 C16orf52Q8NHV5 167 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 DNAAF4Q8WXU2 420 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 TAAR8Q969N4 342 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ERLEC1Q96DZ1 483 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CHFRQ96EP1 664 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CCDC114Q96M63 670 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 MGME1Q9BQP7 344 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 GPATCH1Q9BRR8 931 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CDK19Q9BWU1 502 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 MRPL9Q9BYD2 267 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 FAM234AQ9H0X4 552 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 C2orf40Q9H1Z8 148 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 WDR26Q9H7D7 661 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 CNOT10Q9H9A5 744 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 C17orf75Q9HAS0 396 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 NRIP3Q9NQ35 241 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 HEY2Q9UBP5 337 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC24A2Q9UI40 661 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 LIPGQ9Y5X9 500 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 POMT1Q9Y6A1 747 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ARHGEF28Q8N1W1 1705 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 NWD2Q9ULI1 1742 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 DISP2A7MBM2 1401 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 PPIP5K1Q6PFW1 1433 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 ACEP12821 1306 aa3.18□□□□□ -1.9
TRAPPC11-205ENST00000506426 TOPAZ1Q8N9V7 1692 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 CAMTA1Q9Y6Y1 1673 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 UTRNP46939 3433 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 A0A0B4J293 547 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 GOLGA6L9A6NEM1 432 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ANXA2P2A6NMY6 339 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 CCDC188H7C350 402 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 J3QR06 171 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 PSMD14O00487 310 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TIMM23O14925 209 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SLC16A5O15375 505 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 KCNN4O15554 427 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZBTB43O43298 467 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 STX6O43752 255 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TSPAN1O60635 241 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ZNF217O75362 1048 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 RBMXL2O75526 392 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 CREG1O75629 220 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SOX30O94993 753 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 CELF2O95319 508 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SYF2O95926 243 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 FGBP02675 491 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 ATP6V1B1P15313 513 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 UGT1A1P22309 533 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 HRH2P25021 359 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 HSPA4P34932 840 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 APOBEC1P41238 236 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 NUDT6P53370 316 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 HNRNPH2P55795 449 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TAS2R38P59533 333 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SNRPEP62304 92 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 RBPJQ06330 500 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SRSF1Q07955 248 aaKnown RBP eCLIP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 HSPB3Q12988 150 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 E2F5Q15329 346 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 EFNB3Q15768 340 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SYT16Q17RD7 645 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 DNTTIP2Q5QJE6 756 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 MPP7Q5T2T1 576 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 PLA2G4FQ68DD2 849 aa3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 TYW3Q6IPR3 259 aaKnown RBP3.17□□□□□ -1.9
TRAPPC11-205ENST00000506426 SHC4Q6S5L8 630 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms