RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 CLPBQ9H078 707 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 CDC42EP4Q9H3Q1 356 aaKnown RBP8.91□□□□□ -0.98
NR1I3-219ENST00000504010 POLR1BQ9H9Y6 1135 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 MRM3Q9HC36 420 aaKnown RBP8.91□□□□□ -0.98
NR1I3-219ENST00000504010 LRRC4CQ9HCJ2 640 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 TRIM39Q9HCM9 518 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 GPR27Q9NS67 375 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 STARD5Q9NSY2 213 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 MTRF1LQ9UGC7 380 aaKnown RBP8.91□□□□□ -0.98
NR1I3-219ENST00000504010 APOBEC3BQ9UH17 382 aaKnown RBP8.91□□□□□ -0.98
NR1I3-219ENST00000504010 CRYL1Q9Y2S2 319 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 ST14Q9Y5Y6 855 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 FAM169AQ9Y6X4 670 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 TDRD6O60522 2096 aaKnown RBP8.91□□□□□ -0.98
NR1I3-219ENST00000504010 ZNF106Q9H2Y7 1883 aaKnown RBP8.91□□□□□ -0.98
NR1I3-219ENST00000504010 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
NR1I3-219ENST00000504010 TRBV5-4A0A0C4DH59 114 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 MAGEB16A2A368 324 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 H7C0S8 307 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SMAPO00193 183 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 GRID2O43424 1007 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SUV39H1O43463 412 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SGTAO43765 313 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SNX2O60749 519 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 DNAJC6O75061 913 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 HAUS5O94927 633 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 MT-CO3P00414 261 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 TNFP01375 233 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 CTSEP14091 401 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 PAMP19021 973 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 PSMA3P25788 255 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 HTR1BP28222 390 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SLC1A2P43004 574 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 EIF3BP55884 814 aaKnown RBP8.9□□□□□ -0.98
NR1I3-219ENST00000504010 YPEL5P62699 121 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 GABREP78334 506 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 LAMB3Q13751 1172 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 GTF2H3Q13889 308 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 PTK2BQ14289 1009 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SEPT7Q16181 437 aaKnown RBP8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SPANXN3Q5MJ09 141 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 LDLRAP1Q5SW96 308 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 ZDHHC20Q5W0Z9 365 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 STEAP4Q687X5 459 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 CNSTQ6PJW8 725 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SLC30A9Q6PML9 568 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 CCDC81Q6ZN84 652 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 C3orf62Q6ZUJ4 267 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 NLRP8Q86W28 1048 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 RAVER1Q8IY67 606 aaKnown RBP8.9□□□□□ -0.98
NR1I3-219ENST00000504010 DDHD1Q8NEL9 900 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 FBF1Q8TES7 1133 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 GRAMD1AQ96CP6 724 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 CERS2Q96G23 380 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 DCUN1D1Q96GG9 259 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 TTC25Q96NG3 672 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 DEPDC7Q96QD5 511 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 VPS35Q96QK1 796 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 NDNQ99608 321 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 COPS8Q99627 209 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 LRRC61Q9BV99 259 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 TRIM4Q9C037 500 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 OSGEPL1Q9H4B0 414 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SARS2Q9NP81 518 aaKnown RBP8.9□□□□□ -0.98
NR1I3-219ENST00000504010 KCTD5Q9NXV2 234 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 ZDHHC3Q9NYG2 299 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 SIRPGQ9P1W8 387 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 NFKBIL1Q9UBC1 381 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-219ENST00000504010 GALPQ9UBC7 116 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 RIMKLBQ9ULI2 386 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 PSAT1Q9Y617 370 aa8.9□□□□□ -0.98
NR1I3-219ENST00000504010 NDC80O14777 642 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 EIF3HO15372 352 aaKnown RBP eCLIP8.89□□□□□ -0.99
NR1I3-219ENST00000504010 NUAK1O60285 661 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 NDUFS3O75489 264 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 POP7O75817 140 aaKnown RBP8.89□□□□□ -0.99
NR1I3-219ENST00000504010 PIAS2O75928 621 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 EML2O95834 649 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 S1PR4O95977 384 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 CSF2P04141 144 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 ITGB2P05107 769 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 ATP1B2P14415 290 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-219ENST00000504010 SAT1P21673 171 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 DGKAP23743 735 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 TEAD1P28347 426 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 GABRB3P28472 473 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 GMPRP36959 345 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 HK3P52790 923 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 CTBSQ01459 385 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 CUL1Q13616 776 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 NFE2L1Q14494 772 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 INSCQ1MX18 579 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 PROX2Q3B8N5 592 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 GPR33Q49SQ1 333 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 PYCR3Q53H96 274 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 CTSL3PQ5NE16 218 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 RBM20Q5T481 1227 aaKnown RBP8.89□□□□□ -0.99
NR1I3-219ENST00000504010 TEDDM1Q5T9Z0 273 aa8.89□□□□□ -0.99
NR1I3-219ENST00000504010 CDCP2Q5VXM1 449 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms