RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ADAM21Q9UKJ8 722 aa4.43□□□□□ -1.7
CNN3-206ENST00000487539 LOXL2Q9Y4K0 774 aa4.43□□□□□ -1.7
CNN3-206ENST00000487539 MDC1Q14676 2089 aaKnown RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 TMEM233B4DJY2 109 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 TARM1B6A8C7 271 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 H0YIZ8 118 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 CLDN3O15551 220 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 LATO43561 262 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 TCEA3O75764 348 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 TJP3O95049 919 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 INMTO95050 263 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 CBX6O95503 412 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 YWHAQP27348 245 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.7
CNN3-206ENST00000487539 ADPRHP54922 357 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 CLDN2P57739 230 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 NOP14P78316 857 aaKnown RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 MYL7Q01449 175 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 FMO1Q01740 532 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 CCNIQ14094 377 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 TMEM132DQ14C87 1099 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 INPP5JQ15735 1006 aaPredicted RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 SOWAHAQ2M3V2 549 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 PCID2Q5JVF3 399 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 ZNF776Q68DI1 518 aaPredicted RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 SLC39A4Q6P5W5 647 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 ZNF517Q6ZMY9 492 aaPredicted RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 NEK8Q86SG6 692 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 TMEM135Q86UB9 458 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 ADIPOR2Q86V24 386 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 MMAAQ8IVH4 418 aaKnown RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 SLC35F3Q8IY50 421 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 GLIS1Q8NBF1 620 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 CCDC148Q8NFR7 591 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 OR56A3Q8NH54 315 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 UCMAQ8WVF2 138 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 FBXO32Q969P5 355 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 GRAMD1AQ96CP6 724 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 PCED1BQ96HM7 432 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 KCNK16Q96T55 309 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 DPCDQ9BVM2 203 aaPredicted RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 FSD1LQ9BXM9 530 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 KRTAP4-4Q9BYR3 166 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 LSG1Q9H089 658 aaKnown RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 NUP62CLQ9H1M0 184 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 RSPH9Q9H1X1 276 aaPredicted RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 BHMT2Q9H2M3 363 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 TCEAL2Q9H3H9 227 aaPredicted RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 PCDHA12Q9UN75 941 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 FRMD4BQ9Y2L6 1034 aa4.42□□□□□ -1.7
CNN3-206ENST00000487539 MRPS18BQ9Y676 258 aaKnown RBP4.42□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3DA0A087WVF3 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3IA0A087WXS9 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3EA0A087X179 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3KA0A087X1G2 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 LOC101059948A0A1B0GTJ6 334 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3FA6NER0 549 aaPredicted RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 LRRC72A6NJI9 287 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3LB9A6J9 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 PRSS44E7EML9 344 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 PSMD9O00233 223 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 FOXN3O00409 490 aaPredicted RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 NPC1O15118 1278 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 RBMXL2O75526 392 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 GCATO75600 419 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CNTN5O94779 1100 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 SORBS2O94875 1100 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 ZDHHC11BP0C7U3 371 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3HP0C7X1 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CD99P14209 185 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 PRLRP16471 622 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 HLA-FP30511 346 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 HNRNPH3P31942 346 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 SLC8A1P32418 973 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 UGT1A3P35503 534 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 HARS2P49590 506 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 ACOT2P49753 483 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 NUMBP49757 651 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 ZBTB16Q05516 673 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CDC20Q12834 499 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 C1orf61Q13536 156 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 SEMA5AQ13591 1074 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 DHX8Q14562 1220 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 C16orf72Q14CZ0 275 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 NECTIN1Q15223 517 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CST6Q15828 149 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 SLC45A4Q5BKX6 768 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 MDH1BQ5I0G3 518 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3GQ6DHY5 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 OR6B2Q6IFH4 312 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3CQ6IPX1 549 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 LINGO4Q6UY18 593 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 Q6ZWC4 215 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 DSG4Q86SJ6 1040 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CAND1Q86VP6 1230 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 SFTPA2Q8IWL1 248 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 TBC1D3Q8IZP1 549 aaPredicted RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 TMEM161BQ8NDZ6 487 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms