RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CEP170Q5SW79 1584 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 SLC22A2O15244 555 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 PAPSS1O43252 624 aaPredicted RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 LDLRP01130 860 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 IGHV4-38-2P0DP08 117 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 NMBRP28336 390 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 HOXC8P31273 242 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 PPIGQ13427 754 aaKnown RBP eCLIP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 KCNC3Q14003 757 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 ASPRV1Q53RT3 343 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 RAB41Q5JT25 222 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 CEP85LQ5SZL2 805 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 RBMS3Q6XE24 437 aaKnown RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 C4orf50Q6ZRC1 276 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 FOXP4Q8IVH2 680 aaPredicted RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 APLFQ8IW19 511 aaPredicted RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 L3MBTL4Q8NA19 623 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 TMEM190Q8WZ59 177 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 SENP5Q96HI0 755 aaPredicted RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 SMARCAD1Q9H4L7 1026 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 DNAJC18Q9H819 358 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 BLOC1S4Q9NUP1 217 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 DDX43Q9NXZ2 648 aaKnown RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 SUCLA2Q9P2R7 463 aaPredicted RBP3.82□□□□□ -1.8
LINC00888-204ENST00000487386 AMACRQ9UHK6 382 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 PNMA2Q9UL42 364 aa3.82□□□□□ -1.8
LINC00888-204ENST00000487386 KIAA0556O60303 1618 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 GRIN2AQ12879 1464 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 ARAP1Q96P48 1450 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 CLIP1P30622 1438 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 GPR137BO60478 399 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 CIDEAO60543 219 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 ZG16O60844 167 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 RSL1D1O76021 490 aaKnown RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 APOHP02749 345 aaPredicted RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 NR3C1P04150 777 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 MMP9P14780 707 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 CBLP22681 906 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 HOXD13P35453 343 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 THOP1P52888 689 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 GEMIN4P57678 1058 aaKnown RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 CXCL9Q07325 125 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 MFAP5Q13361 173 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 DUSP28Q4G0W2 176 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 PLEKHS1Q5SXH7 462 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 FAM53AQ6NSI3 398 aaPredicted RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 DENND5BQ6ZUT9 1274 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 GPALPP1Q8IXQ4 340 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 WDSUB1Q8N9V3 476 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 TBC1D16Q8TBP0 767 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 SEMA4DQ92854 862 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 ZNF582Q96NG8 517 aaPredicted RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 GHITMQ9H3K2 345 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 HRH4Q9H3N8 390 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 SYNCQ9H7C4 482 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 PELI2Q9HAT8 420 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 ADPRHL2Q9NX46 363 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 WSB2Q9NYS7 404 aaPredicted RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 LAS1LQ9Y4W2 734 aaKnown RBP3.81□□□□□ -1.8
LINC00888-204ENST00000487386 PCDHGA5Q9Y5G8 931 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 HECW1Q76N89 1606 aa3.81□□□□□ -1.8
LINC00888-204ENST00000487386 KIF26BQ2KJY2 2108 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 SYNJ2O15056 1496 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 AQRO60306 1485 aaKnown RBP eCLIP3.8□□□□□ -1.85e-6■■□□□ 14.3
LINC00888-204ENST00000487386 FHAD1B1AJZ9 1412 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 FLT1P17948 1338 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 ZNF644Q9H582 1327 aaPredicted RBP3.8□□□□□ -1.8
LINC00888-204ENST00000487386 LNP1A1A4G5 178 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 AP3D1O14617 1153 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 TO15178 435 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 PRSS56P0CW18 603 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 LIFP15018 202 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 ATP12AP54707 1039 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 DRG2P55039 364 aaKnown RBP3.8□□□□□ -1.8
LINC00888-204ENST00000487386 MFAP4P55083 255 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 GNB1P62873 340 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 CREB5Q02930 508 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 KRTAP27-1Q3LI81 207 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 ZNF876PQ49A33 203 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 GCNT6Q5T4J0 391 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 ARHGAP11AQ6P4F7 1023 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 KLC3Q6P597 504 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 NOTCH2NLQ7Z3S9 236 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 PLD3Q8IV08 490 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 CRYBG2Q8N1P7 616 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 OR2T12Q8NG77 320 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 CEP295NLQ96MC4 621 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 PSD2Q9BQI7 771 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 BICC1Q9H694 974 aaKnown RBP3.8□□□□□ -1.8
LINC00888-204ENST00000487386 SLC52A3Q9NQ40 469 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 TBC1D22BQ9NU19 505 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 MIOSQ9NXC5 875 aa3.8□□□□□ -1.8
LINC00888-204ENST00000487386 TNIKQ9UKE5 1360 aa3.79□□□□□ -1.8
LINC00888-204ENST00000487386 ZNF541Q9H0D2 1346 aa3.79□□□□□ -1.8
LINC00888-204ENST00000487386 OR2A25A4D2G3 310 aa3.79□□□□□ -1.8
LINC00888-204ENST00000487386 A6NCN8 305 aa3.79□□□□□ -1.8
LINC00888-204ENST00000487386 LRRC72A6NJI9 287 aa3.79□□□□□ -1.8
LINC00888-204ENST00000487386 DUXAA6NLW8 204 aa3.79□□□□□ -1.8
LINC00888-204ENST00000487386 WDHD1O75717 1129 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms