RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PCYT1BQ9Y5K3 369 aaPredicted RBP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 PMS2P1A4D2B8 440 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 H3BQF6 201 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 KRT38O76015 456 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 MAZP56270 477 aaKnown RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 PCBP4P57723 403 aaKnown RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 TLE3Q04726 772 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 PEX6Q13608 980 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 TAF1AQ15573 450 aaPredicted RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 CLPPQ16740 277 aaPredicted RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 TSTD2Q5T7W7 516 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 KIAA0930Q6ICG6 404 aaPredicted RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 DOK6Q6PKX4 331 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 SLC30A9Q6PML9 568 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 LRRC69Q6ZNQ3 347 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 MARK2Q7KZI7 788 aaKnown RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 CLEC14AQ86T13 490 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 SLITRK4Q8IW52 837 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 SPACA3Q8IXA5 215 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 LMNTD2Q8IXW0 634 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 PPM1NQ8N819 430 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 GPR26Q8NDV2 337 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 ZNF248Q8NDW4 579 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 BLOC1S5Q8TDH9 187 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 STYXQ8WUJ0 223 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 ARL8AQ96BM9 186 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 MFSD3Q96ES6 412 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 CRELD1Q96HD1 420 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 TMEM74Q96NL1 305 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 C19orf43Q9BQ61 176 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 FAM167BQ9BTA0 163 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 DHRS4Q9BTZ2 278 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 PRORYQ9H606 182 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 RMI1Q9H9A7 625 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 THSD1Q9NS62 852 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 C20orf96Q9NUD7 363 aaPredicted RBP15.39■□□□□ 0.05
CPSF3-203ENST00000475482 ZNF711Q9Y462 761 aa15.39■□□□□ 0.05
CPSF3-203ENST00000475482 MGAQ8IWI9 3026 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 ZCWPW2A0A1B0GU75 182 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 MROH6A6NGR9 719 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 INPP4BO15327 924 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 ITGA2BP08514 1039 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 KRT15P19012 456 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 NMBRP28336 390 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 ACTR1BP42025 376 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 GPR3P46089 330 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 INHBCP55103 352 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 ACTR1AP61163 376 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 SQSTM1Q13501 440 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 THOC5Q13769 683 aaKnown RBP15.38■□□□□ 0.05
CPSF3-203ENST00000475482 TMED2Q15363 201 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 TTMPQ5BVD1 217 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 TMPRSS9Q7Z410 1059 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 GLT6D1Q7Z4J2 308 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 KCNMB4Q86W47 210 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 GALNT13Q8IUC8 556 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 Q8N9G6 341 aaPredicted RBP15.38■□□□□ 0.05
CPSF3-203ENST00000475482 FAM76AQ8TAV0 307 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 PATE1Q8WXA2 126 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 MTBPQ96DY7 904 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 PLAC1Q9HBJ0 212 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 RAD18Q9NS91 495 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 TREX1Q9NSU2 369 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 NOVA2Q9UNW9 492 aaKnown RBP15.38■□□□□ 0.05
CPSF3-203ENST00000475482 ACTL7BQ9Y614 415 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 ATRXP46100 2492 aa15.38■□□□□ 0.05
CPSF3-203ENST00000475482 SMG1Q96Q15 3661 aaKnown RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 A6NCN8 305 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 PLD2O14939 933 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 PPM1DO15297 605 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 NUAK1O60285 661 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 PIRTP0C851 137 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 BPIP17213 487 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 LPOP22079 712 aaPredicted RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 RBMS1P29558 406 aaKnown RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 HMGCLP35914 325 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 FASLGP48023 281 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 PRAMEP78395 509 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 MSLNQ13421 630 aaPredicted RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 TRMT10BQ6PF06 316 aaKnown RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 CES3Q6UWW8 571 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 TRAM1L1Q8N609 369 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 DTX3LQ8TDB6 740 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 DCAKDQ8WVC6 231 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 TLCD1Q96CP7 247 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 FCRL3Q96P31 734 aaPredicted RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 CPNE1Q99829 537 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 ZSCAN5AQ9BUG6 496 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 SUDS3Q9H7L9 328 aaPredicted RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 TBK1Q9UHD2 729 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 ACSL6Q9UKU0 697 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 ATXN7L1Q9ULK2 861 aaPredicted RBP15.37■□□□□ 0.05
CPSF3-203ENST00000475482 PCDHGA7Q9Y5G6 932 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 SPO11Q9Y5K1 396 aa15.37■□□□□ 0.05
CPSF3-203ENST00000475482 GPR89AB7ZAQ6 455 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 AURKAO14965 403 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 CHUKO15111 745 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 LDB2O43679 373 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 VAPBO95292 243 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 CPNE6O95741 557 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms