RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 SRBD1Q8N5C6 995 aaKnown RBP4.13□□□□□ -1.75
PRKD3-206ENST00000464552 SLC24A4Q8NFF2 622 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 METTL6Q8TCB7 284 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 DNAAF4Q8WXU2 420 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 MMABQ96EY8 250 aaPredicted RBP4.13□□□□□ -1.75
PRKD3-206ENST00000464552 PIP5K1AQ99755 562 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 EIF2AK1Q9BQI3 630 aaKnown RBP4.13□□□□□ -1.75
PRKD3-206ENST00000464552 PDCL3Q9H2J4 239 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 HCFC1R1Q9NWW0 138 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 UBA2Q9UBT2 640 aaPredicted RBP4.13□□□□□ -1.75
PRKD3-206ENST00000464552 FBXL2Q9UKC9 423 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 PADI3Q9ULW8 664 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 UBN2Q6ZU65 1347 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 FER1L6Q2WGJ9 1857 aa4.13□□□□□ -1.75
PRKD3-206ENST00000464552 WDR90Q96KV7 1748 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 SLX4Q8IY92 1834 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 CCDC88AQ3V6T2 1871 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 A0A1W2PPH5 198 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 M0QZ24 198 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 HS3ST1O14792 307 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 KCNN4O15554 427 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 FAM106CPP0CH98 169 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 KRT10P13645 584 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 PAX1P15863 534 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 POLR2CP19387 275 aaPredicted RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 UGT1A1P22309 533 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 ICAM3P32942 547 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 APOBEC1P41238 236 aaKnown RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 TBX2Q13207 712 aaPredicted RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 MAD2L1Q13257 205 aaPredicted RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 CCDC96Q2M329 555 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 ATF7IPQ6VMQ6 1270 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 R3HCC1LQ7Z5L2 792 aaKnown RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 ACVR1CQ8NER5 493 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 OR14L1PQ8NHC6 308 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 SMARCE1Q969G3 411 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 INTS12Q96CB8 462 aaKnown RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 FBXO17Q96EF6 278 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 POLR3CQ9BUI4 534 aaPredicted RBP4.12□□□□□ -1.75
PRKD3-206ENST00000464552 MYH16Q9H6N6 1097 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 MAGIXQ9H6Y5 334 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 SLC28A3Q9HAS3 691 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 SCPEP1Q9HB40 452 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 FAM118AQ9NWS6 357 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 HACL1Q9UJ83 578 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 KLHL20Q9Y2M5 609 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 MAU2Q9Y6X3 613 aa4.12□□□□□ -1.75
PRKD3-206ENST00000464552 SBF1O95248 1867 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 DICER1Q9UPY3 1922 aaKnown RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 ZCWPW2A0A1B0GU75 182 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 FAM90A26D6RGX4 464 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 DVL1O14640 695 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 JRKO75564 520 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 NKX2-2O95096 273 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 PAK4O96013 591 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 IL7RP16871 459 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 ZNF23P17027 643 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CRIP2P52943 208 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 DVL1P1P54792 670 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 ZBED6P86452 979 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 TMEM115Q12893 351 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CSTF3Q12996 717 aaKnown RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 GRAPQ13588 217 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 TWISTNBQ3B726 338 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CRY2Q49AN0 593 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CCDC152Q4G0S7 254 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CDONQ4KMG0 1287 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 STXBP5Q5T5C0 1151 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 PAPD4Q6PIY7 484 aaKnown RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 KLHDC8BQ8IXV7 354 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CNTROBQ8N137 903 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 HMGCLL1Q8TB92 370 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 GRAPLQ8TC17 118 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 RFFLQ8WZ73 363 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 SCRN2Q96FV2 425 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 ZNF583Q96ND8 569 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 SEC62Q99442 399 aaKnown RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 SIL1Q9H173 461 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 CWC25Q9NXE8 425 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 C9orf78Q9NZ63 289 aaPredicted RBP4.11□□□□□ -1.75
PRKD3-206ENST00000464552 OR14J1Q9UGF5 321 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 POLG2Q9UHN1 485 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 ABCC4O15439 1325 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 IL16Q14005 1332 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 ZNF541Q9H0D2 1346 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 LAMB2P55268 1798 aa4.11□□□□□ -1.75
PRKD3-206ENST00000464552 DDX60Q8IY21 1712 aaKnown RBP4.1□□□□□ -1.75
PRKD3-206ENST00000464552 ANKRD28O15084 1053 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 SYNGR3O43761 229 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 BBOX1O75936 387 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 PRSS1P07477 247 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 CFC1BP0CG36 223 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 CFC1P0CG37 223 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 EPHX2P34913 555 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 BSGP35613 385 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 CLDN20P56880 219 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 FRG1Q14331 258 aaKnown RBP4.1□□□□□ -1.75
PRKD3-206ENST00000464552 TNIP1Q15025 636 aa4.1□□□□□ -1.75
PRKD3-206ENST00000464552 SOWAHCQ53LP3 525 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms