RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PCDH7O60245 1069 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 CAVIN2O95810 425 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 PLGP00747 810 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-205ENST00000464541 TUBBP07437 444 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 MSH3P20585 1137 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 GLIPR1P48060 266 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 SNX16P57768 344 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 TMF1P82094 1093 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 NR1D2Q14995 579 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 PCLAFQ15004 111 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 WDR38Q5JTN6 314 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 TMCO3Q6UWJ1 677 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 LINGO4Q6UY18 593 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 HAUS6Q7Z4H7 955 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 PPFIBP2Q8ND30 876 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 FBXO17Q96EF6 278 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
PTCD3-205ENST00000464541 PRMT6Q96LA8 375 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-205ENST00000464541 NEK1Q96PY6 1258 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 PPIL3Q9H2H8 161 aaKnown RBP5.53□□□□□ -1.52
PTCD3-205ENST00000464541 SLA2Q9H6Q3 261 aa5.53□□□□□ -1.52
PTCD3-205ENST00000464541 ELOVL7A1L3X0 281 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 PRR32B1ATL7 298 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 TO15178 435 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 SSX4O60224 188 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 GFPT2O94808 682 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 TRIM21P19474 475 aaKnown RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 TCEA1P23193 301 aaKnown RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 GSG1LQ6UXU4 331 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 CEACAM20Q6UY09 585 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 LDB1Q86U70 411 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 KBTBD6Q86V97 674 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 MCUQ8NE86 351 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 OR10V1Q8NGI7 309 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 ERLEC1Q96DZ1 483 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 MTERF3Q96E29 417 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 ZNF624Q9P2J8 865 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 WBP11Q9Y2W2 641 aaKnown RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 SNX8Q9Y5X2 465 aa5.52□□□□□ -1.53
PTCD3-205ENST00000464541 TCF20Q9UGU0 1960 aaKnown RBP5.52□□□□□ -1.53
PTCD3-205ENST00000464541 PMS2P5A8MQ11 134 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 ERVV-2B6SEH9 535 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 K7ENM7 598 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 PRAMEF11O60813 436 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 NR3C1P04150 777 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 TPOP07202 933 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 IGHV4-38-2P0DP08 117 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 STAT2P52630 851 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 LINC01547P58512 204 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 RPS18P62269 152 aaKnown RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 STK4Q13043 487 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 PLA2G7Q13093 441 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 BAATQ14032 418 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 RBM39Q14498 530 aaKnown RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 ALS2CLQ60I27 953 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 DENND5BQ6ZUT9 1274 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 ADGRA1Q86SQ6 560 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 AACSQ86V21 672 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 STPG4Q8N801 248 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 PTPMT1Q8WUK0 201 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 PRPF31Q8WWY3 499 aaKnown RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 ZNF524Q96C55 264 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 ZNF582Q96NG8 517 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-205ENST00000464541 PAFAH2Q99487 392 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 NME7Q9Y5B8 376 aa5.51□□□□□ -1.53
PTCD3-205ENST00000464541 PASKQ96RG2 1323 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 GLOD5A6NK44 160 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 MAGEB17A8MXT2 336 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 SMIM1B2RUZ4 78 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 BLOC1S5-TXNDC5H3BN57 136 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 ENTPD3O75355 529 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 CREG1O75629 220 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 GJB3O75712 270 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 CKMT2P17540 419 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 GNAZP19086 355 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 EIF2DP41214 584 aaKnown RBP5.5□□□□□ -1.53
PTCD3-205ENST00000464541 TUBB4BP68371 445 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 ZC2HC1CQ53FD0 456 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-205ENST00000464541 OTUD3Q5T2D3 398 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-205ENST00000464541 CFAP161Q6P656 301 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 ANO5Q75V66 913 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 PCGF5Q86SE9 256 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 PLD3Q8IV08 490 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 OR2T12Q8NG77 320 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 MOSPD2Q8NHP6 518 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 SLC22A18Q96BI1 424 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 FAM81BQ96LP2 452 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 OR6C1Q96RD1 312 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 MBNL1Q9NR56 388 aaKnown RBP5.5□□□□□ -1.53
PTCD3-205ENST00000464541 OLFML3Q9NRN5 406 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 COQ3Q9NZJ6 369 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 NPAP1Q9NZP6 1156 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 MRPL15Q9P015 296 aaKnown RBP5.5□□□□□ -1.53
PTCD3-205ENST00000464541 GAB2Q9UQC2 676 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 PTRH2Q9Y3E5 179 aaKnown RBP5.5□□□□□ -1.53
PTCD3-205ENST00000464541 GRIP1Q9Y3R0 1128 aa5.5□□□□□ -1.53
PTCD3-205ENST00000464541 LOC102723996A0A087X1L8 192 aa5.49□□□□□ -1.53
PTCD3-205ENST00000464541 A0A0G2JLW4 131 aa5.49□□□□□ -1.53
PTCD3-205ENST00000464541 PRSS51A0A1B0GVH4 220 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms