RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 FNDC3AQ9Y2H6 1198 aaKnown RBP11.85□□□□□ -0.51
TNRC6A-204ENST00000462400 LOC285095A0A1B0GVY8 99 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TYW5A2RUC4 315 aaKnown RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 GFRA2O00451 464 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 B4GAT1O43505 415 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 SLC35E2BP0CK96 405 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 PABPC1P11940 636 aaKnown RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 IL10P22301 178 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 IDUAP35475 653 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 CTSOP43234 321 aaPredicted RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 CSE1LP55060 971 aaKnown RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TMBIM6P55061 237 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 LMAN2Q12907 356 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 GPM6BQ13491 265 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 OXA1LQ15070 435 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 ATP6AP1Q15904 470 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TSTD2Q5T7W7 516 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 THOC7Q6I9Y2 204 aaKnown RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 HTR3DQ70Z44 454 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TMEM25Q86YD3 366 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 SLC41A1Q8IVJ1 513 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 MFSD6LQ8IWD5 586 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 CENPLQ8N0S6 344 aaPredicted RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 CADM3Q8N126 398 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 LPCAT1Q8NF37 534 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 OR6P1Q8NGX9 317 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 RMDN1Q96DB5 314 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 ZNF599Q96NL3 588 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 ALPK1Q96QP1 1244 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 SLC25A23Q9BV35 468 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 CD320Q9NPF0 282 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 IFT80Q9P2H3 777 aaPredicted RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 SPO11Q9Y5K1 396 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 OR51B4Q9Y5P0 310 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TARM1B6A8C7 271 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 BNIP3LO60238 219 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 PTPN2P17706 415 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 PSMA4P25789 261 aaKnown RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 CAPGP40121 348 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 OPRL1P41146 370 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 SLC12A1Q13621 1099 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 INPP5AQ14642 412 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 FAM45BPQ6NSW5 357 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 RPS27LQ71UM5 84 aaKnown RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 FAM45AQ8TCE6 357 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 MAGEE2Q8TD90 523 aaPredicted RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 HDAC10Q969S8 669 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 NXNL1Q96CM4 212 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 ALG14Q96F25 216 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TBATAQ96M53 351 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 GPR22Q99680 433 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 TUBA1CQ9BQE3 449 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 KLHL25Q9H0H3 589 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 POMKQ9H5K3 350 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 ARNT2Q9HBZ2 717 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 MTF2Q9Y483 593 aaPredicted RBP11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 DGKBQ9Y6T7 804 aa11.84□□□□□ -0.51
TNRC6A-204ENST00000462400 NEMP2A6NFY4 417 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 AP3B1O00203 1094 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 LDB2O43679 373 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 RASAL1O95294 804 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 SNAP29O95721 258 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 CEBPBP17676 345 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 CR2P20023 1033 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 OXTRP30559 389 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 STK19P49842 368 aaPredicted RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 HLCSP50747 726 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 CCT8P50990 548 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 IRAK1BP1Q5VVH5 260 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 TMC5Q6UXY8 1006 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 DDIASQ8IXT1 998 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 EFHBQ8N7U6 833 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 ITFG1Q8TB96 612 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 SNX19Q92543 992 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 CENPNQ96H22 339 aaPredicted RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 FEM1CQ96JP0 617 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 PPP1R2P1Q96PQ5 205 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 MTIF3Q9H2K0 278 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 TNKS2Q9H2K2 1166 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 SMPD3Q9NY59 655 aaPredicted RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 MARCH4Q9P2E8 410 aaPredicted RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 LHX3Q9UBR4 397 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 INTS6Q9UL03 887 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 HELZP42694 1942 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 RFXAPO00287 272 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 NME4O00746 187 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 ACOX3O15254 700 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 CPNE6O95741 557 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 PRLP01236 227 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 NR4A1P22736 598 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 ELK4P28324 431 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 EEF1DP29692 281 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 RHOAP61586 193 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 KCNJ8Q15842 424 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 CYBRD1Q53TN4 286 aa11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 RBM20Q5T481 1227 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 ASTLQ6HA08 431 aaPredicted RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 ZC3HC1Q86WB0 502 aaKnown RBP11.83□□□□□ -0.52
TNRC6A-204ENST00000462400 SNX29P2Q8IUI4 249 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms