RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FBXO25Q8TCJ0 367 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 BCAS4Q8TDM0 211 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 CENPTQ96BT3 561 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TLCD1Q96CP7 247 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 PGM2Q96G03 612 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SNF8Q96H20 258 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 RBM41Q96IZ5 413 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 NLRP4Q96MN2 994 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 COG8Q96MW5 612 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 HIST1H2AAQ96QV6 131 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SIGLEC11Q96RL6 698 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 CHCHD6Q9BRQ6 235 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TMEM109Q9BVC6 243 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 NFKBIZQ9BYH8 718 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 OSBPL8Q9BZF1 889 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ROPN1BQ9BZX4 212 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRIM7Q9C029 511 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 MTMR12Q9C0I1 747 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SPRTNQ9H040 489 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 STMN4Q9H169 189 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 LHX5Q9H2C1 402 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASB7Q9H672 318 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 CNOT10Q9H9A5 744 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ROPN1Q9HAT0 212 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ZBTB26Q9HCK0 441 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SEPSECSQ9HD40 501 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 G6PC2Q9NQR9 355 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 SMYD2Q9NRG4 433 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 CISHQ9NSE2 258 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARL8BQ9NVJ2 186 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 WDR35Q9P2L0 1181 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ASIC3Q9UHC3 531 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANAPC5Q9UJX4 755 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 DAPP1Q9UN19 280 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 RRP15Q9Y3B9 282 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 RLFQ13129 1914 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 COL1A2P08123 1366 aa3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 BRCA1P38398 1863 aaKnown RBP3.5□□□□□ -1.85
HMGB3P11-201ENST00000440127 A0A087WUV0 522 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 GMNCA6NCL1 334 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A18PA6NE21 464 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A16PA6NEW6 464 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SIGLEC16A6NMB1 481 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A9PA6NNJ1 464 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A5PA8MXJ8 464 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 LACTBL1A8MY62 500 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 TTC34A8MYJ7 566 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 E7EVH7 732 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 TULP2O00295 520 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 NDUFAB1O14561 156 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 NDC80O14777 642 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RASGRF2O14827 1237 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RGS16O15492 202 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 B4GALT5O43286 388 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RIPK2O43353 540 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SPRY2O43597 315 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 STRNO43815 780 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 C22orf31O95567 290 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 AGTP01019 485 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SHBGP04278 402 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 LGALS2P05162 132 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANXA6P08133 673 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT7P08729 469 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A15PP0C7V4 464 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FAM90A14PP0C7W9 464 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 STAG3L1P0CL83 205 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RALAP11233 206 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 VDRP11473 427 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CETPP11597 493 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 KRT3P12035 628 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 P4HA1P13674 534 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 PSMA2P25787 234 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 IVDP26440 423 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 TKTP29401 623 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 GJC1P36383 396 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CLCN3P51790 818 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SLC12A2P55011 1212 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RPL7AP62424 266 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RBP5P82980 135 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 SRSF1Q07955 248 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ARHGAP1Q07960 439 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC15Q0P6D6 951 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ATP1A4Q13733 1029 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 MFSD13AQ14CX5 517 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 TRIP13Q15645 432 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 HADHQ16836 314 aaKnown RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 KCTD19Q17RG1 926 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 BTBD16Q32M84 506 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 MANEALQ5VSG8 457 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 DENND1BQ6P3S1 775 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 RHBDF2Q6PJF5 856 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 TAOK1Q7L7X3 1001 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 GSTA5Q7RTV2 222 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 ANKRD23Q86SG2 305 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 NLRP14Q86W24 1093 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC25Q86WR0 208 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CDR2LQ86X02 465 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 P3H2Q8IVL5 708 aa3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 CCDC117Q8IWD4 279 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P11-201ENST00000440127 FSTL5Q8N475 847 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms