RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 ELK4P28324 431 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 HTR1EP28566 365 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 GALK1P51570 392 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 ZXDBP98169 803 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 ILF2Q12905 390 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 KCTD21Q4G0X4 260 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 EFL1Q7Z2Z2 1120 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 CLHC1Q8NHS4 586 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 C12orf43Q96C57 262 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 CGREF1Q99674 301 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 EGFL8Q99944 293 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 FEM1AQ9BSK4 669 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 NPLQ9BXD5 320 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 SEZ6LQ9BYH1 1024 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 TLR9Q9NR96 1032 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 IRAK4Q9NWZ3 460 aa17.1■□□□□ 0.33
SEMA3B-204ENST00000433753 ANKRD28O15084 1053 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 SLC25A14O95258 325 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 HMOX2P30519 316 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 CAPGP40121 348 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 TM4SF4P48230 202 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 TRAF3Q13114 568 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 TAF12Q16514 161 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 ITIH5Q86UX2 942 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 ZBTB46Q86UZ6 589 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 HS3ST5Q8IZT8 346 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 FIG4Q92562 907 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 SCLYQ96I15 445 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 MUS81Q96NY9 551 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 TBCDQ9BTW9 1192 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 VN1R3Q9BXE9 311 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 ASB8Q9H765 288 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 TRPM5Q9NZQ8 1165 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 ZNHIT2Q9UHR6 403 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 VPS51Q9UID3 782 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 NEUROG3Q9Y4Z2 214 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 ST14Q9Y5Y6 855 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 NUP214P35658 2090 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 H0Y858 1186 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 CLDN7O95471 211 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 SELPP16109 830 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 CSKP41240 450 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 CACNG1Q06432 222 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 LAPTM5Q13571 262 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 NEDD8Q15843 81 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 AASDHQ4L235 1098 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 GPR107Q5VW38 600 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 KRTCAP2Q8N6L1 136 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 PAPD5Q8NDF8 572 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 FBXO30Q8TB52 745 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 TIMMDC1Q9NPL8 285 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 NUDT4Q9NZJ9 180 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 PLXNA4Q9HCM2 1894 aa17.09■□□□□ 0.33
SEMA3B-204ENST00000433753 GAPDHSO14556 408 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 MYCP01106 439 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 FCGR1AP12314 374 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 HMGCLP35914 325 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 EMP3P54852 163 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 ENPP6Q6UWR7 440 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 ABRAXAS1Q6UWZ7 409 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 APCDD1Q8J025 514 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 GOLM1Q8NBJ4 401 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 OR10A6Q8NH74 314 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 CLPBQ9H078 707 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 POLR1BQ9H9Y6 1135 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 GALNT8Q9NY28 637 aa17.08■□□□□ 0.33
SEMA3B-204ENST00000433753 H7C0S8 307 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 UPK1AO00322 258 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 ATE1O95260 518 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 POLR2IP36954 125 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 ESRRGP62508 458 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 PCBP2Q15366 365 aaKnown RBP eCLIP17.08■□□□□ 0.329e-10■■■□□ 15.5
SEMA3B-204ENST00000433753 FAM174BQ3ZCQ3 159 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 AARS2Q5JTZ9 985 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 RIMKLAQ8IXN7 391 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 ITFG1Q8TB96 612 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 SGCDQ92629 289 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 TMBIM1Q969X1 311 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 PLD4Q96BZ4 506 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 ZNF583Q96ND8 569 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 THUMPD3Q9BV44 507 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 CXorf21Q9HAI6 301 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 COMMD8Q9NX08 183 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 KLQ9UEF7 1012 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.32
SEMA3B-204ENST00000433753 C1orf232A0A0U1RR37 186 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 TYW5A2RUC4 315 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 FZD6O60353 706 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 NKG7Q16617 165 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 ZBED5Q49AG3 693 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 GTDC1Q4AE62 458 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 KIAA1841Q6NSI8 718 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 PATL1Q86TB9 770 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 STK32CQ86UX6 486 aa17.07■□□□□ 0.32
SEMA3B-204ENST00000433753 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms