RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 IFNB1P01574 187 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ATP1B2P14415 290 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ITGALP20701 1170 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ACRV1P26436 265 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 FOXN2P32314 431 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 HADHAP40939 763 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 HALP42357 657 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 KCNJ1P48048 391 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ARCN1P48444 511 aaKnown RBP12.22□□□□□ -0.45
SMPD4-204ENST00000430682 PDE1BQ01064 536 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 SEMA5AQ13591 1074 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 GPR33Q49SQ1 333 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-204ENST00000430682 IRGCQ6NXR0 463 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 CACNA2D3Q8IZS8 1091 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 LSM14AQ8ND56 463 aaKnown RBP12.22□□□□□ -0.45
SMPD4-204ENST00000430682 OR13J1Q8NGT2 312 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 STYXQ8WUJ0 223 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 KLHL6Q8WZ60 621 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 EXTL1Q92935 676 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ULK4Q96C45 1275 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 PPP1R2P1Q96PQ5 205 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 SLC12A9Q9BXP2 914 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ASPSCR1Q9BZE9 553 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 ZNF768Q9H5H4 540 aaKnown RBP12.22□□□□□ -0.45
SMPD4-204ENST00000430682 EPHA6Q9UF33 1036 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 TMEM184BQ9Y519 407 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-204ENST00000430682 FLNCQ14315 2725 aa12.22□□□□□ -0.45
SMPD4-204ENST00000430682 PSMD3O43242 534 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 STK17BO94768 372 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 TIAF1O95411 115 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 CCDC175P0C221 793 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 F8A1P23610 371 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 STIP1P31948 543 aaKnown RBP12.21□□□□□ -0.45
SMPD4-204ENST00000430682 CXCR5P32302 372 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 PREPP48147 710 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 RAB15P59190 212 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 FOXM1Q08050 763 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 SEMA3AQ14563 771 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 KCNAB1Q14722 419 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 CACHD1Q5VU97 1274 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 CEACAM20Q6UY09 585 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 NAPRTQ6XQN6 538 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 ZNF534Q76KX8 674 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 TAS2R42Q7RTR8 314 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 PRSS42Q7Z5A4 293 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 RBM12BQ8IXT5 1001 aaKnown RBP12.21□□□□□ -0.45
SMPD4-204ENST00000430682 PHC3Q8NDX5 983 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 CCDC112Q8NEF3 446 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 ELMO2Q96JJ3 720 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 OR6C1Q96RD1 312 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 MAP3K3Q99759 626 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 RAB33BQ9H082 229 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 OR52A5Q9H2C5 316 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 COG4Q9H9E3 785 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 CASS4Q9NQ75 786 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 RAB6BQ9NRW1 208 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 IL17BQ9UHF5 180 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 SLC24A2Q9UI40 661 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 ACSL5Q9ULC5 683 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 PPP2R2CQ9Y2T4 447 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 PCDHB11Q9Y5F2 797 aa12.21□□□□□ -0.45
SMPD4-204ENST00000430682 PCM1Q15154 2024 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 GOLGA6L6A8MZA4 724 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 POLR1CO15160 346 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 OR1I1O60431 355 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 ZNF189O75820 626 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 RASSF9O75901 435 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 FGGP02679 453 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 FOLR1P15328 257 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 NELFEP18615 380 aaKnown RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 MSNP26038 577 aaKnown RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 CACNG1Q06432 222 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 CDH17Q12864 832 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 CCNG2Q16589 344 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 TBR1Q16650 682 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 TSTD2Q5T7W7 516 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 IL22RA1Q8N6P7 574 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 HM13Q8TCT9 377 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 HDAC10Q969S8 669 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 WBP1Q96G27 269 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 TEFMQ96QE5 360 aaKnown RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
SMPD4-204ENST00000430682 FRMD8P1Q9BZ68 369 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 AKIRIN1Q9H9L7 192 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-204ENST00000430682 MYO18BQ8IUG5 2567 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 COL12A1Q99715 3063 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 C17orf113A0A1B0GUU1 675 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 TCRBV7S3A2A0A539 114 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 OR6C74A6NCV1 312 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 OR5K3A6NET4 321 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
SMPD4-204ENST00000430682 BTN3A3O00478 584 aa12.19□□□□□ -0.46
SMPD4-204ENST00000430682 TOX3O15405 576 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-204ENST00000430682 NKX2-8O15522 239 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms