RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 JUNDP17535 347 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CD9P21926 228 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CBSP35520 551 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 MPLP40238 635 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACTR1BP42025 376 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 GLRBP48167 497 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 KPNA2P52292 529 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACTR1AP61163 376 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CTBSQ01459 385 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 PLOD1Q02809 727 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 GRIK2Q13002 908 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CSHL1Q14406 222 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 DUOXA1Q1HG43 343 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM83EQ2M2I3 478 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 TSNAXIP1Q2TAA8 658 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 KIF19Q2TAC6 998 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRRT3Q5FWE3 981 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 AGAP9Q5VTM2 703 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 LRRC8EQ6NSJ5 796 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 KLC3Q6P597 504 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 TMEM207Q6UWW9 146 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 EXOC3L1Q86VI1 746 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CENPLQ8N0S6 344 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 NKAPQ8N5F7 415 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 LILRA3Q8N6C8 439 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRSS33Q8NF86 280 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 CEP76Q8TAP6 659 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 ANKRD49Q8WVL7 239 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 ALKBH8Q96BT7 664 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 FAM122AQ96E09 287 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 LINC00615Q96LM1 132 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 LRRC61Q9BV99 259 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 GSDMCQ9BYG8 508 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 TMEM168Q9H0V1 697 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 TCEAL2Q9H3H9 227 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 KCNK9Q9NPC2 374 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 FSCN3Q9NQT6 498 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRNAU1APQ9NX07 287 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 KLHL42Q9P2K6 505 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC23A2Q9UGH3 650 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 PNMA8BQ9ULN7 279 aaPredicted RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 RUVBL2Q9Y230 463 aaKnown RBP7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 SNX11Q9Y5W9 270 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 ACTL7BQ9Y614 415 aa7.76□□□□□ -1.17
HMGA1P4-201ENST00000428643 WDFY4Q6ZS81 3184 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 C17orf113A0A1B0GUU1 675 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC5A10A0PJK1 596 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PABPN1LA6NDY0 278 aaKnown RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PATE3B3GLJ2 98 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 H3BQF6 201 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 EIF3FO00303 357 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 IFRD1O00458 451 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 BTN3A1O00481 513 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SDC3O75056 442 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLCO2B1O94956 709 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 WISP3O95389 354 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 TSPAN12O95859 305 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SYF2O95926 243 aaKnown RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CSF2P04141 144 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CELA2BP08218 269 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 COL6A2P12110 1019 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CREB1P16220 341 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 TFEBP19484 476 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 IDSP22304 550 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 AK4P27144 223 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 RPL10P27635 214 aaKnown RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC26A3P40879 764 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 HALP42357 657 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CTSKP43235 329 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCT5P48643 541 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ARRB1P49407 418 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CSRP3P50461 194 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CLCNKAP51800 687 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ATP6V0D1P61421 351 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 HNRNPKP61978 463 aaKnown RBP eCLIP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC18A2Q05940 514 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 DMPKQ09013 629 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 TCF15Q12870 199 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 RPA4Q13156 261 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 C1orf61Q13536 156 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ELOCQ15369 112 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCDC6Q16204 474 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZNF658BQ4V348 819 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 TRIM61Q5EBN2 209 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 TNFAIP8L3Q5GJ75 292 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PRAMEF14Q5SWL7 426 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PEAR1Q5VY43 1037 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 LAIR1Q6GTX8 287 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 FRA10AC1Q70Z53 315 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 TAF8Q7Z7C8 310 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CLEC14AQ86T13 490 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 PDZD3Q86UT5 571 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 LCA5Q86VQ0 697 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 VRK3Q8IV63 474 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 SLC22A15Q8IZD6 547 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ANKRD42Q8N9B4 389 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 BANPQ8N9N5 519 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CCDC63Q8NA47 563 aa7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 ZNF548Q8NEK5 533 aaPredicted RBP7.75□□□□□ -1.17
HMGA1P4-201ENST00000428643 CFAP61Q8NHU2 1237 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms