RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TRIM13O60858 407 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 TNFP01375 233 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 C8GP07360 202 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 BPGMP07738 259 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 DHRS4L1P0CG22 281 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 TFEBP19484 476 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 GRK2P25098 689 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 CD38P28907 300 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 SERPINB4P48594 390 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 FNTBP49356 437 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 CTSCP53634 463 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 WDR4P57081 412 aaKnown RBP10.14□□□□□ -0.79
MDC1-205ENST00000425072 CLDN2P57739 230 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 IRF9Q00978 393 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 FOXK2Q01167 660 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 ZNF460Q14592 562 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 ZNF528Q3MIS6 628 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 ACSBG2Q5FVE4 666 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 CDKL4Q5MAI5 379 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 METRNLQ641Q3 311 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 ATG16L1Q676U5 607 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 TTC23LQ6PF05 361 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 DOK6Q6PKX4 331 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 CYHR1Q6ZMK1 362 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 RAB44Q7Z6P3 723 aaPredicted RBP10.14□□□□□ -0.79
MDC1-205ENST00000425072 ADAMTSL2Q86TH1 951 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 TRIM74Q86UV6 250 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 PIM3Q86V86 326 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 GPSM1Q86YR5 675 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 GALNT13Q8IUC8 556 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 HOMEZQ8IX15 550 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 CPNE9Q8IYJ1 553 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 RGL4Q8IZJ4 473 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
MDC1-205ENST00000425072 PPP1R14CQ8TAE6 165 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 RAB3IL1Q8TBN0 382 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 HM13Q8TCT9 377 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 MAGEC3Q8TD91 643 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 MCOLN3Q8TDD5 553 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 CKAP2Q8WWK9 683 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 DNASE2BQ8WZ79 361 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 SNX19Q92543 992 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 TIMM29Q9BSF4 260 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 MANSC1Q9H8J5 431 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 EBF2Q9HAK2 575 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 FZD3Q9NPG1 666 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 AASDHPPTQ9NRN7 309 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 ZNF358Q9NW07 568 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 COPG2Q9UBF2 871 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 MBD1Q9UIS9 605 aaPredicted RBP10.14□□□□□ -0.79
MDC1-205ENST00000425072 RNF112Q9ULX5 631 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 GPSM3Q9Y4H4 160 aa10.14□□□□□ -0.79
MDC1-205ENST00000425072 ABCA7Q8IZY2 2146 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 BPTFQ12830 3046 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 ANKRD12Q6UB98 2062 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 GON4LQ3T8J9 2241 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SLC5A10A0PJK1 596 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 TMEM202A6NGA9 273 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SRRM3A6NNA2 597 aaPredicted RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 TARM1B6A8C7 271 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 H3BM21 787 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 KERAO60938 352 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 LILRB5O75023 590 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 H2AFYO75367 372 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 SNUPNO95149 360 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 S100BP04271 92 aaPredicted RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 ENO2P09104 434 aaPredicted RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 THEGLP0DJG4 465 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 GNSP15586 552 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 IDSP22304 550 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 ATP5F1P24539 256 aaPredicted RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 MAP4P27816 1152 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 AVPR2P30518 371 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 DPP6P42658 865 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 GLRBP48167 497 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 CLCNKAP51800 687 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SRP54P61011 504 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 IRX4P78413 519 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 NHLH1Q02575 133 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 DMPKQ09013 629 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 DLG1Q12959 904 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 LRP8Q14114 963 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 BOP1Q14137 746 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 GBX1Q14549 363 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 PYCR3Q53H96 274 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 GCNT7Q6ZNI0 430 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 ZNF547Q8IVP9 402 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SPATA6LQ8N4H0 392 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 TMEM151AQ8N4L1 468 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 OXR1Q8N573 874 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 FRMD1Q8N878 549 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 LRRC8CQ8TDW0 803 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SKA2Q8WVK7 121 aaPredicted RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 GAB3Q8WWW8 586 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 ASB11Q8WXH4 323 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 GLMNQ92990 594 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SLC30A3Q99726 388 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 MYOCQ99972 504 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 SLC12A9Q9BXP2 914 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms