RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 TRIP4Q15650 581 aaPredicted RBP14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 SPARTQ8N0X7 666 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 PAF1Q8N7H5 531 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 OR4F6Q8NGB9 312 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 PEX13Q92968 403 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 NACA2Q9H009 215 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 FAM118AQ9NWS6 357 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 BAG5Q9UL15 447 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 PDE10AQ9Y233 779 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 F5H5T6 163 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 CBX4O00257 560 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 YBEYP58557 167 aaPredicted RBP14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 GRSF1Q12849 480 aaKnown RBP eCLIP14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 ABRAXAS2Q15018 415 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 CYP2A13Q16696 494 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 FAM174BQ3ZCQ3 159 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 PERM1Q5SV97 790 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 TTC23Q5W5X9 447 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 SAPCD2Q86UD0 394 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 PDPRQ8NCN5 879 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 CLHC1Q8NHS4 586 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 CD200R1Q8TD46 325 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 ZIC5Q96T25 663 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 FUNDC2Q9BWH2 189 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 APOL5Q9BWW9 433 aa14.95□□□□□ -0.02
SEMA3B-203ENST00000419007 TSPAN12O95859 305 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 PORP16435 677 aaPredicted RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 TACR2P21452 398 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 BCAP31P51572 246 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 RAD23AP54725 363 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 KCNAB2Q13303 367 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 SPCS2Q15005 226 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 CRY1Q16526 586 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 TRIM16LQ309B1 348 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 MORN1Q5T089 497 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 NADSYN1Q6IA69 706 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 GCNT7Q6ZNI0 430 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 SLC47A1Q96FL8 570 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ITCHQ96J02 903 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ZNF583Q96ND8 569 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 UGT2B28Q9BY64 529 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ACTL8Q9H568 366 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ACTR8Q9H981 624 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 SCUBE2Q9NQ36 999 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 UBA2Q9UBT2 640 aaPredicted RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 SEPT3Q9UH03 358 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ANGPTL3Q9Y5C1 460 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 SLC30A1Q9Y6M5 507 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 NUP214P35658 2090 aaPredicted RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ZNF623O75123 536 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 PRKD3O94806 890 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 GGT1P19440 569 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 TYMPP19971 482 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 LPOP22079 712 aaPredicted RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 RPS24P62847 133 aaKnown RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 HMGCS1Q01581 520 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 NKG7Q16617 165 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 NFE2Q16621 373 aaPredicted RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 C6orf141Q5SZD1 244 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 FATE1Q969F0 183 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ISG20Q96AZ6 181 aaKnown RBP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ZNF382Q96SR6 550 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 ZBTB18Q99592 522 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 IPPKQ9H8X2 491 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 PCDHB8Q9UN66 801 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 PCDHB5Q9Y5E4 795 aa14.94□□□□□ -0.02
SEMA3B-203ENST00000419007 PFDN6O15212 129 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 CDH3P22223 829 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 ALDH4A1P30038 563 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 HOXC8P31273 242 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 GDF5P43026 501 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 HSPA7P48741 367 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 PWP1Q13610 501 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 MAPKAPK3Q16644 382 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 CTSL3PQ5NE16 218 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 BTLAQ7Z6A9 289 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 MILR1Q7Z6M3 343 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 IGFN1Q86VF2 1251 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 PHACTR4Q8IZ21 702 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 GIPC2Q8TF65 315 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 EGFL8Q99944 293 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 AMBRA1Q9C0C7 1298 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 IKZF5Q9H5V7 419 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 PARNO95453 639 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 S100BP04271 92 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 OPRL1P41146 370 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 MAGEA10P43363 369 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 TTPAP49638 278 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 OCA2Q04671 838 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 CD47Q08722 323 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 TWF1Q12792 350 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 SFSWAPQ12872 951 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 SKIV2LQ15477 1246 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 TAF1AQ15573 450 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 CTU2Q2VPK5 515 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 CTXN3Q4LDR2 81 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 GOLGA7Q7Z5G4 137 aa14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 RBM23Q86U06 439 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-203ENST00000419007 SNX29P2Q8IUI4 249 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms