RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 SARS2Q9NP81 518 aaKnown RBP13.08□□□□□ -0.32
TMEM248-203ENST00000418375 CPNE7Q9UBL6 633 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 FAM8A1Q9UBU6 413 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 GNPTGQ9UJJ9 305 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 VPS9D1Q9Y2B5 631 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 PRSS21Q9Y6M0 314 aa13.08□□□□□ -0.32
TMEM248-203ENST00000418375 GOLGA8KD6RF30 607 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 GOLGA8TH3BQL2 631 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 PPM1DO15297 605 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 TP73O15350 636 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 RRP8O43159 456 aaKnown RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 BRINP1O60477 761 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 BANF1O75531 89 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 TCEA3O75764 348 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 VIPP01282 170 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 SLC35G4P0C7Q5 338 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 XRCC1P18887 633 aaPredicted RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 EIF2S3P41091 472 aaKnown RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 ELK3P41970 407 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 PDIA2Q13087 525 aaKnown RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 SPIDRQ14159 915 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 CRYMQ14894 314 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 NR1D2Q14995 579 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 CDCP2Q5VXM1 449 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 PTRHD1Q6GMV3 140 aaKnown RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 SPRED1Q7Z699 444 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 CILP2Q8IUL8 1156 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 ELMO1Q92556 727 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 CXorf40BQ96DE9 158 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 PWWP2AQ96N64 755 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 DEPDC7Q96QD5 511 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 LRRC1Q9BTT6 524 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 COG4Q9H9E3 785 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 POT1Q9NUX5 634 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 GRHL1Q9NZI5 618 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 SCHIP1Q9P0W5 487 aaPredicted RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 ZC3H7BQ9UGR2 993 aaKnown RBP13.07□□□□□ -0.32
TMEM248-203ENST00000418375 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 PCDHB1Q9Y5F3 818 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 ADAMTS20P59510 1910 aa13.07□□□□□ -0.32
TMEM248-203ENST00000418375 UBA6A0AVT1 1052 aaPredicted RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 E7ESA3 106 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 H3BMM5 538 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 LIN7AO14910 233 aaPredicted RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 BRAFP15056 766 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 ITPKBP27987 946 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 SLC19A1P41440 591 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 PLTPP55058 493 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 UBE2IP63279 158 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 CCL7P80098 99 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 SLC7A5Q01650 507 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 PLOD1Q02809 727 aaPredicted RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 RPA4Q13156 261 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 CLCA4Q14CN2 919 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 SYTL3Q4VX76 610 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 GLE1Q53GS7 698 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 HP1BP3Q5SSJ5 553 aaPredicted RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 ZNF470Q6ECI4 717 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 KCNMB4Q86W47 210 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 RBM12BQ8IXT5 1001 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 FGF11Q92914 225 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 ART4Q93070 314 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 CFAP36Q96G28 342 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 CRELD1Q96HD1 420 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 PANX3Q96QZ0 392 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 GFM1Q96RP9 751 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 CARD6Q9BX69 1037 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 WWP1Q9H0M0 922 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 UCK1Q9HA47 277 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 EPB41L5Q9HCM4 733 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 INTS10Q9NVR2 710 aaKnown RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 KCNK4Q9NYG8 393 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 IL1RAPL1Q9NZN1 696 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 ZNF624Q9P2J8 865 aaPredicted RBP13.06□□□□□ -0.32
TMEM248-203ENST00000418375 PSMD13Q9UNM6 376 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 WDR37Q9Y2I8 494 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 TEX264Q9Y6I9 313 aa13.06□□□□□ -0.32
TMEM248-203ENST00000418375 ATRXP46100 2492 aa13.05□□□□□ -0.32
TMEM248-203ENST00000418375 ARHGEF17Q96PE2 2063 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-203ENST00000418375 OR52A4PA6NMU1 304 aa13.05□□□□□ -0.32
TMEM248-203ENST00000418375 IFRD1O00458 451 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-203ENST00000418375 NTN3O00634 580 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-203ENST00000418375 CSO75390 466 aaKnown RBP13.05□□□□□ -0.32
TMEM248-203ENST00000418375 ESR1P03372 595 aa13.05□□□□□ -0.32
TMEM248-203ENST00000418375 MTHFD1P11586 935 aaKnown RBP13.05□□□□□ -0.32
TMEM248-203ENST00000418375 PPM1FP49593 454 aaPredicted RBP13.05□□□□□ -0.32
TMEM248-203ENST00000418375 EPHA4P54764 986 aa13.05□□□□□ -0.32
TMEM248-203ENST00000418375 ADARP55265 1226 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms