RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 Q6ZVU0 165 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 EPHX4Q8IUS5 362 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 GAB3Q8WWW8 586 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 MRPS31Q92665 395 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 DPF3Q92784 378 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 ZFYVE19Q96K21 471 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 NAA50Q9GZZ1 169 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 GLUD1P00367 558 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 CYBBP04839 570 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 SYN1P17600 705 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 TXNL4AP83876 142 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 LCP2Q13094 533 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 DGCR6Q14129 220 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 CRY1Q16526 586 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 GRAMD4Q6IC98 578 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 ARRDC2Q8TBH0 407 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 BRSK1Q8TDC3 778 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 ROPN1LQ96C74 230 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 SLC2A11Q9BYW1 496 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 PKD2L2Q9NZM6 624 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 USP34Q70CQ2 3546 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 SLC22A3O75751 556 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 FGF1P05230 155 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 MMP2P08253 660 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-204ENST00000409416 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-204ENST00000409416 MAP4P27816 1152 aaKnown RBP13.18□□□□□ -0.3
COL6A2-204ENST00000409416 CSRP3P50461 194 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 PSMD7P51665 324 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ATP1A4Q13733 1029 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 C16orf87Q6PH81 154 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 SPESP1Q6UW49 350 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 GPRIN3Q6ZVF9 776 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ADCK2Q7Z695 626 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 HMGN2P46Q86SG4 172 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 OR10A6Q8NH74 314 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 SNX19Q92543 992 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ISOC1Q96CN7 298 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 RNF31Q96EP0 1072 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 SYTL2Q9HCH5 934 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 CCM2LQ9NUG4 571 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-204ENST00000409416 DOLKQ9UPQ8 538 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ANKRD66B4E2M5 251 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 G6PDP11413 515 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 DEFB103AP81534 67 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 TRIM60Q495X7 471 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 NHSL2Q5HYW2 709 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 BPIFB6Q8NFQ5 453 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 CENPNQ96H22 339 aaPredicted RBP13.18□□□□□ -0.3
COL6A2-204ENST00000409416 TPD52L3Q96J77 140 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 APOLD1Q96LR9 279 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 TSPAN18Q96SJ8 248 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 ROGDIQ9GZN7 287 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
COL6A2-204ENST00000409416 A0A0G2JN53 185 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 STC2O76061 302 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 IDO1P14902 403 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ELK4P28324 431 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 BFSP2Q13515 415 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 SPIDRQ14159 915 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 SYVN1Q86TM6 617 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 TFAP2CQ92754 450 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 NSMCE2Q96MF7 247 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 CHID1Q9BWS9 393 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 AMBNQ9NP70 447 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 MRGBPQ9NV56 204 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 YIPF1Q9Y548 306 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 RP1L1Q8IWN7 2480 aaPredicted RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 IGLV3-25P01717 112 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 CSF2RAP15509 400 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 RPS9P46781 194 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 POLR2JP52435 117 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 IL10RBQ08334 325 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 VAC14Q08AM6 782 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 SFSWAPQ12872 951 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 UGT3A2Q3SY77 523 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 FAM174BQ3ZCQ3 159 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 MANEALQ5VSG8 457 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 KLHL35Q6PF15 583 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 KCTD8Q6ZWB6 473 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 KLK6Q92876 244 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 TIMMDC1Q9NPL8 285 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms