RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 EPHA4P54764 986 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 EIF3BP55884 814 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 RPA4Q13156 261 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 MSS51Q4VC12 460 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 PHF19Q5T6S3 580 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 UNQ6494/PRO21346Q6UXR6 183 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 AGGF1Q8N302 714 aaeCLIP24.82■■□□□ 1.561e-7■■■■□ 23.7
TSPAN4-207ENST00000397411 CALML6Q8TD86 181 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 ATXN7L3BQ96GX2 97 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 PWWP2AQ96N64 755 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 DPYSL5Q9BPU6 564 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 TBC1D10AQ9BXI6 508 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 UCK1Q9HA47 277 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 SLC40A1Q9NP59 571 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 IL1RAPL1Q9NZN1 696 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 VPS9D1Q9Y2B5 631 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 ENTPD2Q9Y5L3 495 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 HEBP2Q9Y5Z4 205 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 FAM169AQ9Y6X4 670 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 COLEC10Q9Y6Z7 277 aa24.82■■□□□ 1.56
TSPAN4-207ENST00000397411 C1QTNF9BB2RNN3 333 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 C1QTNF9P0C862 333 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 OGNP20774 298 aaKnown RBP24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 FMO4P31512 558 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 PREPP48147 710 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 BOP1Q14137 746 aaKnown RBP24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 SPANXN3Q5MJ09 141 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 SPDYE1Q8NFV5 336 aaPredicted RBP24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 GATA6Q92908 595 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 TMEM159Q96B96 161 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 CFAP36Q96G28 342 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 PANX3Q96QZ0 392 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 FERD3LQ96RJ6 166 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 CARD6Q9BX69 1037 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 NRSN2Q9GZP1 204 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 EPB41L1Q9H4G0 881 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 WHRNQ9P202 907 aa24.81■■□□□ 1.56
TSPAN4-207ENST00000397411 PRAMEF33A0A0G2JMD5 474 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 ZCWPW2A0A1B0GU75 182 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 LILRA5A6NI73 299 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 TYRP1P17643 537 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 ELK3P41970 407 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 CSE1LP55060 971 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 PLOD1Q02809 727 aaPredicted RBP24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 CAMK2BQ13554 666 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 PLCL1Q15111 1095 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 ZNF470Q6ECI4 717 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 C8orf74Q6P047 294 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 FOXR1Q6PIV2 292 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 LRRC39Q96DD0 335 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 NXPE2Q96DL1 559 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 RMDN2Q96LZ7 410 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 NUDT22Q9BRQ3 303 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 CCDC86Q9H6F5 360 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 AKAP7Q9P0M2 348 aaPredicted RBP24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 ZC3H7BQ9UGR2 993 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 CHMP2BQ9UQN3 213 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 CRYL1Q9Y2S2 319 aa24.8■■□□□ 1.56
TSPAN4-207ENST00000397411 AGRPO00253 132 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 UBXN7O94888 489 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 APOA4P06727 396 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 NDUFS1P28331 727 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 PDHA2P29803 388 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 PDIA2Q13087 525 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 SQSTM1Q13501 440 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 GPR18Q14330 331 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 CRYMQ14894 314 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 TMED2Q15363 201 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 CAPRIN2Q6IMN6 1127 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 NAPRTQ6XQN6 538 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 B3GNT8Q7Z7M8 397 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 CILP2Q8IUL8 1156 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 LMNTD2Q8IXW0 634 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 KRT222Q8N1A0 295 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 GSDMBQ8TAX9 411 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 FAM167BQ9BTA0 163 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 SEMA6CQ9H3T2 930 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 PPANQ9NQ55 473 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 MRFAP1Q9Y605 127 aa24.79■■□□□ 1.56
TSPAN4-207ENST00000397411 CCDC187A0A096LP49 1063 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CTAGE15A4D2H0 777 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 IQCF5A8MTL0 148 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 H3BMM5 538 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 PROS1P07225 676 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CTAGE8P0CG41 777 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 RPS3P23396 243 aaKnown RBP eCLIP24.78■■□□□ 1.566e-8■■■■■ 37.4
TSPAN4-207ENST00000397411 MPSTP25325 297 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CD151P48509 253 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CYP4F3Q08477 520 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 TYSND1Q2T9J0 566 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 HSP90AA5PQ58FG0 334 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 C3orf38Q5JPI3 329 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 SNAP47Q5SQN1 464 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 DUPD1Q68J44 220 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 DUS1LQ6P1R4 473 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 TMEM71Q6P5X7 295 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CENPUQ71F23 418 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 CTAGE6Q86UF2 777 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 KCNMB4Q86W47 210 aa24.78■■□□□ 1.56
TSPAN4-207ENST00000397411 ANKMY2Q8IV38 441 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms