RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PDZK1P1A8MUH7 402 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 CD3EAPO15446 510 aaKnown RBP16.14■□□□□ 0.17
PHTF1-205ENST00000393357 CD4P01730 458 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 CLK3P49761 638 aaKnown RBP16.14■□□□□ 0.17
PHTF1-205ENST00000393357 MVKQ03426 396 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 TRAF3Q13114 568 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 VGLL4Q14135 290 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 IHHQ14623 411 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 C6orf136Q5SQH8 315 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 PPP2R2DQ66LE6 453 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 LAIR1Q6GTX8 287 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 ZNF486Q96H40 463 aaPredicted RBP16.14■□□□□ 0.17
PHTF1-205ENST00000393357 DHRS1Q96LJ7 313 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 TMEM209Q96SK2 561 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 CGREF1Q99674 301 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 TUBA1CQ9BQE3 449 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 TREX1Q9NSU2 369 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 POLR3BQ9NW08 1133 aaPredicted RBP16.14■□□□□ 0.17
PHTF1-205ENST00000393357 AFF4Q9UHB7 1163 aaKnown RBP16.14■□□□□ 0.17
PHTF1-205ENST00000393357 EIF3LQ9Y262 564 aaKnown RBP16.14■□□□□ 0.17
PHTF1-205ENST00000393357 GMPPBQ9Y5P6 360 aa16.14■□□□□ 0.17
PHTF1-205ENST00000393357 RFPL2O75678 378 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 VIPP01282 170 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 CTSHP09668 335 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 BMPR1AP36894 532 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 ILF2Q12905 390 aaKnown RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 LCP2Q13094 533 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 CDK5R2Q13319 367 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 CLCA4Q14CN2 919 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 AP5B1Q2VPB7 878 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 TRIM60Q495X7 471 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 AGAP7PQ5VUJ5 663 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 KIAA0930Q6ICG6 404 aaPredicted RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 GPR153Q6NV75 609 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 EID3Q8N140 333 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 PDPRQ8NCN5 879 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 KCNN1Q92952 543 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 AGO3Q9H9G7 860 aaKnown RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 FARSBQ9NSD9 589 aaKnown RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 FAM8A1Q9UBU6 413 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 ZNF487B1APH4 448 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 C19orf81C9J6K1 198 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 SOCS7O14512 581 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 TBX18O95935 607 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 CRY1Q16526 586 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 PTPRNQ16849 979 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 FER1L6Q2WGJ9 1857 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 PHYKPLQ8IUZ5 450 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 HID1Q8IV36 788 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 ARHGAP12Q8IWW6 846 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 MFSD4AQ8N468 514 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 SLC10A4Q96EP9 437 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 DUS3LQ96G46 650 aaKnown RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 SPON2Q9BUD6 331 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 TRPV5Q9NQA5 729 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 COL4A5P29400 1685 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 A8MX80 341 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 IGFBP5P24593 272 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 IDH2P48735 452 aaKnown RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 HIST2H2ACQ16777 129 aaPredicted RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 PRAMEF19Q5SWL8 479 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 RANBP10Q6VN20 620 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 CYP4Z1Q86W10 505 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 C10orf111Q8N326 155 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 OR6Q1Q8NGQ2 317 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 ITPKCQ96DU7 683 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 HMCESQ96FZ2 354 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 VAT1Q99536 393 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 SEMA3CQ99985 751 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 TAS2R16Q9NYV7 291 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 ZNF225Q9UK10 706 aa16.13■□□□□ 0.17
PHTF1-205ENST00000393357 INTS6Q9UL03 887 aaKnown RBP16.13■□□□□ 0.17
PHTF1-205ENST00000393357 SIRPB2Q5JXA9 342 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 SPANXN4Q5MJ08 99 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 MARC1Q5VT66 337 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 CACTIN-AS1Q8N1I8 211 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 MUL1Q969V5 352 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 TPD52L3Q96J77 140 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 FCRL5Q96RD9 977 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 CDK5RAP1Q96SZ6 601 aaKnown RBP16.12■□□□□ 0.17
PHTF1-205ENST00000393357 RCAN2Q14206 197 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 UAP1L1Q3KQV9 507 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 NOTUMQ6P988 496 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 HDAC2Q92769 488 aaKnown RBP16.12■□□□□ 0.17
PHTF1-205ENST00000393357 KLRG1Q96E93 195 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 VNN3Q9NY84 501 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 C3orf18Q9UK00 162 aa16.12■□□□□ 0.17
PHTF1-205ENST00000393357 PNMA8CA0A1B0GUJ8 204 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 NDUFS3O75489 264 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 BRCC3P46736 316 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 CLCNKBP51801 687 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 ISL1P61371 349 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 UBE3AQ05086 875 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 CYP27C1Q4G0S4 372 aa16.11■□□□□ 0.17
PHTF1-205ENST00000393357 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.11■□□□□ 0.17
PHTF1-205ENST00000393357 HACD2Q6Y1H2 254 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms