RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PRAMEF11O60813 436 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CREG1O75629 220 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 GLCEO94923 617 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 PGLSO95336 258 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 FESP07332 822 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 LBPP18428 481 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 IGFBP6P24592 240 aaPredicted RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 ACAT1P24752 427 aaKnown RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 ITGB8P26012 769 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 NDUFS1P28331 727 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 TKTP29401 623 aaKnown RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 RFC4P35249 363 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 IDUAP35475 653 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 PRCPP42785 496 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CLCNKAP51800 687 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 RAC3P60763 192 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 UBE2HP62256 183 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 NHLH2Q02577 135 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 OCA2Q04671 838 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 DMWDQ09019 674 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 TNK1Q13470 666 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 IDI1Q13907 227 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 NADK2Q4G0N4 442 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CFAP221Q4G0U5 840 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 ARL13AQ5H913 290 aaPredicted RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM268Q5VZI3 342 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 ARHGAP17Q68EM7 881 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CES3Q6UWW8 571 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 ARSKQ6UWY0 536 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 LRIG3Q6UXM1 1119 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 KLHL36Q8N4N3 616 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 C12orf76Q8N812 135 aaPredicted RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 MNS1Q8NEH6 495 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM185AQ8NFB2 350 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 OR52K1Q8NGK4 314 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 UBLCP1Q8WVY7 318 aaPredicted RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 SLC25A28Q96A46 364 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 AP2M1Q96CW1 435 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 RBM14Q96PK6 669 aaKnown RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 SNX18Q96RF0 628 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 SPATA25Q9BR10 227 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM117Q9H0C3 514 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 DDX47Q9H0S4 455 aaKnown RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CARD9Q9H257 536 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 FN3KQ9H479 309 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CHMP1AQ9HD42 196 aaPredicted RBP6.33□□□□□ -1.4
TRAV35-201ENST00000390462 KLHL1Q9NR64 748 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 HOMER3Q9NSC5 361 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 SLCO1C1Q9NYB5 712 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 UBQLN2Q9UHD9 624 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 ZFYVE9O95405 1425 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 CROCC2H7BZ55 1655 aa6.33□□□□□ -1.4
TRAV35-201ENST00000390462 TRPM2O94759 1503 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 KLRF2D3W0D1 207 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 H0YIV9 168 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 AP4M1O00189 453 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 MATN2O00339 956 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CLDN4O14493 209 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 SUV39H1O43463 412 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 ADH4P08319 380 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 RFPL3SP0C7P2 107 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 PCNAP12004 261 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 SKILP12757 684 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 TGM2P21980 687 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 GATA3P23771 443 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 RPL13P26373 211 aaKnown RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 PTPN4P29074 926 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 RYKP34925 604 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CDKN1AP38936 164 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CENPAP49450 140 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 SMSP52788 366 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 HNRNPKP61978 463 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 SRSF3P84103 164 aaKnown RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 E2F1Q01094 437 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 RHAGQ02094 409 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 ZMYND11Q15326 602 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CNGA3Q16281 694 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 SOWAHAQ2M3V2 549 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 ZNF568Q3ZCX4 644 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 MCMDC2Q4G0Z9 681 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 FAM98BQ52LJ0 330 aaKnown RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 TREML2Q5T2D2 321 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 NOTUMQ6P988 496 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 NUDT13Q86X67 352 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CAMK1DQ8IU85 385 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 GPR135Q8IZ08 494 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CADM3Q8N126 398 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 ATL1Q8WXF7 558 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CAVIN3Q969G5 261 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 EGLN2Q96KS0 407 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 TTC25Q96NG3 672 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 MUS81Q96NY9 551 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 ASCL2Q99929 193 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 ADAM2Q99965 735 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 IFT27Q9BW83 186 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 LSG1Q9H089 658 aaKnown RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 YY1AP1Q9H869 796 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 TXNRD2Q9NNW7 524 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 MBD1Q9UIS9 605 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms