RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 JUNP05412 331 aaKnown RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 OLR1P78380 273 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 GALNT2Q10471 571 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 CDH18Q13634 790 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 TTC23LQ6PF05 361 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 Q6ZNX1 250 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 ADCK2Q7Z695 626 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 GPR65Q8IYL9 337 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 OR5K1Q8NHB7 308 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 GRPEL2Q8TAA5 225 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 MED8Q96G25 268 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 GMLQ99445 158 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PDGFDQ9GZP0 370 aaPredicted RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 CDV3Q9UKY7 258 aaKnown RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 SSR3Q9UNL2 185 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SLC9A8Q9Y2E8 581 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 A0A1W2PP18 115 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 NOS1APO75052 506 aaPredicted RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 INMTO95050 263 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 RPLP0P05388 317 aaKnown RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 MC4RP32245 332 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PABPC1LQ4VXU2 614 aaKnown RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 PNPLA1Q8N8W4 532 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PHF10Q8WUB8 498 aaKnown RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 HMCESQ96FZ2 354 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PARK7Q99497 189 aaKnown RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 BEX2Q9BXY8 128 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 A0A1W2PQH9 124 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 OR6C70A6NIJ9 312 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PDHXO00330 501 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 CLCNKBP51801 687 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SCN1BQ07699 218 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SYCE2Q6PIF2 218 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 OSTM1Q86WC4 334 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SCAMP5Q8TAC9 235 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SLC13A3Q8WWT9 602 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PSMG2Q969U7 264 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 CGREF1Q99674 301 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SNTG1Q9NSN8 517 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 GALPQ9UBC7 116 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 MALT1Q9UDY8 824 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 ADAM30Q9UKF2 790 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 RNF11Q9Y3C5 154 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 TSPAN4O14817 238 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SUV39H1O43463 412 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 BMP2P12643 396 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ATF4P18848 351 aaPredicted RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 HNF4AP41235 474 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SLC15A1P46059 708 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 PLEKHG6Q3KR16 790 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 RNF219Q5W0B1 726 aaPredicted RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 PRR23CQ6ZRP0 262 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 CFAP52Q8N1V2 620 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 STARD8Q92502 1023 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 C1GALT1C1Q96EU7 318 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ITCHQ96J02 903 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 FOPNLQ96NB1 174 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 IPPKQ9H8X2 491 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SLC27A5Q9Y2P5 690 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ARL5AQ9Y689 179 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 NME4O00746 187 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SCELO95171 688 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 IL6P05231 212 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 OR4Q2P0C623 313 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 GLI3P10071 1580 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 PKMP14618 531 aaKnown RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 RFC2P35250 354 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 GNPDA1P46926 289 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 C1QTNF8P60827 252 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 RPS7P62081 194 aaKnown RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 PAQR3Q6TCH7 311 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 C16orf59Q7L2K0 433 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 OR13C4Q8NGS5 318 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 TUBA1CQ9BQE3 449 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ZNF224Q9NZL3 707 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 MAP10Q9P2G4 905 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ZNF490Q9ULM2 529 aaPredicted RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 PCDHB5Q9Y5E4 795 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 COL4A1P02462 1669 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SNTNA6NMZ2 147 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SCAMP3O14828 347 aaKnown RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 PLA2G16P53816 162 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 RAB25P57735 213 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 NCS1P62166 190 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 GMPR2Q9P2T1 348 aaKnown RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 GSTK1Q9Y2Q3 226 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 TESMINQ9Y4I5 508 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 KCTD3Q9Y597 815 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 COL1A2P08123 1366 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 FAM234BA2RU67 622 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 BCAS1O75363 584 aaPredicted RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 PRKCGP05129 697 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 FABP3P05413 133 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 HSPA7P48741 367 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ITGA1P56199 1179 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms