RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 FAM136AQ96C01 138 aa18.18■□□□□ 0.5
CDX4-201ENST00000373514 LINC00615Q96LM1 132 aaPredicted RBP18.18■□□□□ 0.5
CDX4-201ENST00000373514 BIRC8Q96P09 236 aa18.18■□□□□ 0.5
CDX4-201ENST00000373514 CCM2Q9BSQ5 444 aa18.18■□□□□ 0.5
CDX4-201ENST00000373514 ROPN1BQ9BZX4 212 aaPredicted RBP18.18■□□□□ 0.5
CDX4-201ENST00000373514 ROPN1Q9HAT0 212 aaPredicted RBP18.18■□□□□ 0.5
CDX4-201ENST00000373514 TOR4AQ9NXH8 423 aa18.18■□□□□ 0.5
CDX4-201ENST00000373514 RABGEF1Q9UJ41 708 aa18.18■□□□□ 0.5
CDX4-201ENST00000373514 EXOC1LA0A1B0GW35 172 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 TLDC2A0PJX2 215 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 MGAT4DA6NG13 374 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 RASGRF2O14827 1237 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 NIPSNAP2O75323 286 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 TCEA3O75764 348 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 OR56A5P0C7T3 313 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 BRAFP15056 766 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 RPS3P23396 243 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDX4-201ENST00000373514 PPARGP37231 505 aaPredicted RBP18.17■□□□□ 0.5
CDX4-201ENST00000373514 PREPP48147 710 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 ACADVLP49748 655 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 CLCNKAP51800 687 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 BOP1Q14137 746 aaKnown RBP18.17■□□□□ 0.5
CDX4-201ENST00000373514 NR0B2Q15466 257 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 CCDC157Q569K6 752 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 RNF187Q5TA31 235 aaPredicted RBP18.17■□□□□ 0.5
CDX4-201ENST00000373514 OGFOD3Q6PK18 319 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 C2CD4AQ8NCU7 369 aaPredicted RBP18.17■□□□□ 0.5
CDX4-201ENST00000373514 HM13Q8TCT9 377 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 CALML6Q8TD86 181 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 SLC37A2Q8TED4 501 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 CENPHQ9H3R5 247 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 ACSS3Q9H6R3 686 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 COG4Q9H9E3 785 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 MOCS1Q9NZB8 636 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 OGFRQ9NZT2 677 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 GNPTGQ9UJJ9 305 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 PSAT1Q9Y617 370 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 DNMT3AQ9Y6K1 912 aaPredicted RBP18.17■□□□□ 0.5
CDX4-201ENST00000373514 PTPRBP23467 1997 aa18.17■□□□□ 0.5
CDX4-201ENST00000373514 CNOT1A5YKK6 2376 aaKnown RBP18.16■□□□□ 0.5
CDX4-201ENST00000373514 TCRBV9S1A1TA0A576 114 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 TNFSF14O43557 240 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 HAUS5O94927 633 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 F3P13726 295 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 VCLP18206 1134 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 GABRB3P28472 473 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 OAS2P29728 719 aaKnown RBP18.16■□□□□ 0.5
CDX4-201ENST00000373514 STX2P32856 288 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 SLCO1A2P46721 670 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 CSE1LP55060 971 aaKnown RBP18.16■□□□□ 0.5
CDX4-201ENST00000373514 C14orf28Q4W4Y0 310 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 TTMPQ5BVD1 217 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 PERM1Q5SV97 790 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 TEDDM1Q5T9Z0 273 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 PTRHD1Q6GMV3 140 aaKnown RBP18.16■□□□□ 0.5
CDX4-201ENST00000373514 ZNF549Q6P9A3 640 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 CNSTQ6PJW8 725 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 CROCCP2Q86T23 111 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 LMNTD2Q8IXW0 634 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 SPDYE1Q8NFV5 336 aaPredicted RBP18.16■□□□□ 0.5
CDX4-201ENST00000373514 ELMO1Q92556 727 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 TCF12Q99081 682 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 CDC6Q99741 560 aa18.16■□□□□ 0.5
CDX4-201ENST00000373514 INTS10Q9NVR2 710 aaKnown RBP18.16■□□□□ 0.5
CDX4-201ENST00000373514 CPED1A4D0V7 1026 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 OR52A4PA6NMU1 304 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 TRIM16O95361 564 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 FTH1P02794 183 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 CKMT1AP12532 417 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 CEACAM1P13688 526 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 SDHBP21912 280 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 IDSP22304 550 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 PDHA2P29803 388 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 ID4P47928 161 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
CDX4-201ENST00000373514 MGAT5Q09328 741 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 FRG1Q14331 258 aaKnown RBP18.15■□□□□ 0.5
CDX4-201ENST00000373514 CLCA4Q14CN2 919 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 EFTUD2Q15029 972 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDX4-201ENST00000373514 KLHL38Q2WGJ6 581 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 DUS1LQ6P1R4 473 aaKnown RBP18.15■□□□□ 0.5
CDX4-201ENST00000373514 CFAP206Q8IYR0 622 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 WWP1Q9H0M0 922 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 GALPQ9UBC7 116 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 PADI4Q9UM07 663 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 CFAP20Q9Y6A4 193 aaKnown RBP18.15■□□□□ 0.5
CDX4-201ENST00000373514 RNF215Q9Y6U7 377 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 SPEGQ15772 3267 aa18.15■□□□□ 0.5
CDX4-201ENST00000373514 PRAMEF33A0A0G2JMD5 474 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 CXorf49A8MYA2 514 aaPredicted RBP18.14■□□□□ 0.49
CDX4-201ENST00000373514 POC1B-GALNT4F8VUJ3 575 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 QSOX1O00391 747 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 C1QAP02745 245 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 FTH1P19P0C7X4 201 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 CKMT2P17540 419 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 CCR7P32248 378 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 PUM1Q14671 1186 aaKnown RBP eCLIP18.14■□□□□ 0.49
CDX4-201ENST00000373514 RBM20Q5T481 1227 aaKnown RBP18.14■□□□□ 0.49
CDX4-201ENST00000373514 METRNLQ641Q3 311 aa18.14■□□□□ 0.49
CDX4-201ENST00000373514 IYDQ6PHW0 289 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms