RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 DAG1Q14118 895 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 MAPK11Q15759 364 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 CACHD1Q5VU97 1274 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 BEND5Q7L4P6 421 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 DET1Q7L5Y6 550 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 R3HCC1LQ7Z5L2 792 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 LIX1Q8N485 282 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 MFSD2AQ8NA29 543 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 FUBP3Q96I24 572 aaKnown RBP eCLIP12.7□□□□□ -0.384e-8■■■□□ 18
HMGCS1-201ENST00000325110 NMRK2Q9NPI5 230 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 VAPAQ9P0L0 249 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ASPDHA6ND91 283 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 C16orf96A6NNT2 1141 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 UPK3BL1B0FP48 263 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 UPK3BL2E5RIL1 263 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 FFAR2O15552 330 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 CAPN15O75808 1086 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 FTH1P02794 183 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 MYCLP1P12525 358 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 SHMT2P34897 504 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 OR1D2P34982 312 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 OCA2Q04671 838 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 CRHR2Q13324 411 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 LRRC73Q5JTD7 316 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 GALNT10Q86SR1 603 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 PNPT1Q8TCS8 783 aaKnown RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 CD200R1Q8TD46 325 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC13A3Q8WWT9 602 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 CCDC97Q96F63 343 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC47A1Q96FL8 570 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 C8orf48Q96LL4 319 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 GLT1D1Q96MS3 346 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 UTS2RQ9UKP6 389 aa12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF490Q9ULM2 529 aaPredicted RBP12.7□□□□□ -0.38
HMGCS1-201ENST00000325110 BPTFQ12830 3046 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 WASH4PA8MWX3 477 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 XYLBO75191 536 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 EEDO75530 441 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 HOXD9P28356 352 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 CCND3P30281 292 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 HSPA14Q0VDF9 509 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 Q6ZSR9 355 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 FAM43BQ6ZT52 329 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 THAP5Q7Z6K1 395 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 PROSER1Q86XN7 944 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 GLMNQ92990 594 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 PYCR2Q96C36 320 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 PSKH2Q96QS6 385 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 UGT2B28Q9BY64 529 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 MAGEH1Q9H213 219 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 CD320Q9NPF0 282 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 DLGAP1O14490 977 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 TBL1XO60907 577 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 OTCP00480 354 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 ENO2P09104 434 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 MBL2P11226 248 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF7P17097 686 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 HRH2P25021 359 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 PSMB9P28065 219 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 SGSHP51688 502 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 LRRC8DQ7L1W4 858 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 ADAMTSL2Q86TH1 951 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 SERPINA9Q86WD7 417 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 RNF168Q8IYW5 571 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 UHRF1Q96T88 793 aaPredicted RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 TDRD1Q9BXT4 1180 aaKnown RBP12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 VPS4AQ9UN37 437 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 PCDHB7Q9Y5E2 793 aa12.69□□□□□ -0.38
HMGCS1-201ENST00000325110 CDH1P12830 882 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 TCF3P15923 654 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 POLR2IP36954 125 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 NEK2P51955 445 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF140P52738 457 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 CTBSQ01459 385 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF554Q86TJ5 538 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC22A15Q8IZD6 547 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 TEX26Q8N6G2 289 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 FAM126AQ9BYI3 521 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 SELENONQ9NZV5 590 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 KIF17Q9P2E2 1029 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 BLOC1S6Q9UL45 172 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 TBKBP1A7MCY6 615 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 K7ERQ8 282 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 M0R3G1 203 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 XPNPEP2O43895 674 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 EPOP01588 193 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 RAP2AP10114 183 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 UMPSP11172 480 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 RAD23AP54725 363 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 BOP1Q14137 746 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 CRY1Q16526 586 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 TRIM16LQ309B1 348 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 PCDH12Q9NPG4 1184 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ARL15Q9NXU5 204 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ACOX3O15254 700 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 RGS14O43566 566 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms