RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 OR13J1Q8NGT2 312 aa13.22□□□□□ -0.29
SCAF4-201ENST00000286835 CDKN2AIPNLQ96HQ2 116 aa13.22□□□□□ -0.29
SCAF4-201ENST00000286835 MYOCQ99972 504 aa13.22□□□□□ -0.29
SCAF4-201ENST00000286835 SDR39U1Q9NRG7 319 aaPredicted RBP13.22□□□□□ -0.29
SCAF4-201ENST00000286835 TMLHEQ9NVH6 421 aa13.22□□□□□ -0.29
SCAF4-201ENST00000286835 GMIPQ9P107 970 aa13.22□□□□□ -0.29
SCAF4-201ENST00000286835 ELOVL7A1L3X0 281 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 F5H5T6 163 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 OR1I1O60431 355 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 MYO1DO94832 1006 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 KCNE1P15382 129 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 CTPS1P17812 591 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 EEFSECP57772 596 aaKnown RBP13.21□□□□□ -0.29
SCAF4-201ENST00000286835 MADCAM1Q13477 382 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 SPCS2Q15005 226 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 NFE2Q16621 373 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-201ENST00000286835 C18orf21Q32NC0 220 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-201ENST00000286835 ELMSAN1Q6PJG2 1045 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 DTWD1Q8N5C7 304 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 C3orf58Q8NDZ4 430 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 FRS2Q8WU20 508 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.29
SCAF4-201ENST00000286835 IPPKQ9H8X2 491 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 SMPD4Q9NXE4 827 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 FKBPLQ9UIM3 349 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 VPS4AQ9UN37 437 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 PCDHGA8Q9Y5G5 932 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 MYO7AQ13402 2215 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 KRBA1A5PL33 1030 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 NTRK1P04629 796 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 IGFBP5P24593 272 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 HTR6P50406 440 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 NEK2P51955 445 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 OXCT1P55809 520 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 C6orf141Q5SZD1 244 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 HACD2Q6Y1H2 254 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 SLC22A16Q86VW1 577 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 OR6K2Q8NGY2 324 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 CLPBQ9H078 707 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
SCAF4-201ENST00000286835 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.29
SCAF4-201ENST00000286835 FAM234BA2RU67 622 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 BCAS1O75363 584 aaPredicted RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 SERPINA1P01009 418 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 PKMP14618 531 aaKnown RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 CDKN1CP49918 316 aaPredicted RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 CTBSQ01459 385 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 TRAF3Q13114 568 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 SLC13A2Q13183 592 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 SEMA3BQ13214 749 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 SELPLGQ14242 412 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF621Q6ZSS3 439 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 P2RY8Q86VZ1 359 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 CNTN4Q8IWV2 1026 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 SLC7A5P1Q8MH63 180 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 TSGA13Q96PP4 275 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 TUBB1Q9H4B7 451 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 NMUR1Q9HB89 426 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 ATP13A1Q9HD20 1204 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF99A8MXY4 864 aaPredicted RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 LSM1O15116 133 aaKnown RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 ASNA1O43681 348 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 FGF1P05230 155 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 RGS4P49798 205 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 PM20D1Q6GTS8 502 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 OR8H2Q8N162 312 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 PSD4Q8NDX1 1056 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 RBM4BQ9BQ04 359 aaKnown RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 RBM4Q9BWF3 364 aaKnown RBP13.21□□□□□ -0.3
SCAF4-201ENST00000286835 MAF1Q9H063 256 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 USE1Q9NZ43 259 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.3
SCAF4-201ENST00000286835 GON4LQ3T8J9 2241 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 CXCR6O00574 342 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 ULK1O75385 1050 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 S100A3P33764 101 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 TMBIM6P55061 237 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 MLLT6P55198 1093 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 SKIV2LQ15477 1246 aaKnown RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 TRUB1Q8WWH5 349 aaKnown RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 ERGIC3Q9Y282 383 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 LOC100130705A0A1B0GUX0 176 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 SNPHO15079 494 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 NBNO60934 754 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 KERAO60938 352 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 HLA-DPA1P20036 260 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 DCKP27707 260 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 POU1F1P28069 291 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
SCAF4-201ENST00000286835 CD47Q08722 323 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 NPTX1Q15818 432 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
SCAF4-201ENST00000286835 TFB2MQ9H5Q4 396 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms