RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 APODP05090 189 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 PSMC3P17980 439 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 COLEC12Q5KU26 742 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 RFWD3Q6PCD5 774 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 EPGNQ6UW88 154 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 C10orf107Q8IVU9 208 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 MCEMP1Q8IX19 187 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 SAMD14Q8IZD0 417 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-201ENST00000262539 SMARCD2Q92925 531 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 RAD51AP1Q96B01 352 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 ALG9Q9H6U8 611 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 ATAD5Q96QE3 1844 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 C16orf96A6NNT2 1141 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 GSC2O15499 205 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 ATG13O75143 517 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 ZNF140P52738 457 aaPredicted RBP8.12□□□□□ -1.11
PTPN3-201ENST00000262539 EEFSECP57772 596 aaKnown RBP8.12□□□□□ -1.11
PTPN3-201ENST00000262539 CSTF3Q12996 717 aaKnown RBP8.12□□□□□ -1.11
PTPN3-201ENST00000262539 TXNDC8Q6A555 127 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 RAET1GQ6H3X3 334 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 SERPINA13PQ6UXR4 307 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 TRAM1L1Q8N609 369 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 SH3BP4Q9P0V3 963 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
PTPN3-201ENST00000262539 H0Y858 1186 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GFRA2O00451 464 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 BANF1O75531 89 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 RASGRP1O95267 797 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 MATN4O95460 622 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ATP6V1G2O95670 118 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 TTKP33981 857 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 CACNA2D1P54289 1103 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 MAXP61244 160 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ACSM2AQ08AH3 577 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 RPA4Q13156 261 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ITGADQ13349 1161 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GPM6BQ13491 265 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PCLAFQ15004 111 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PCBP2Q15366 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ACSM2BQ68CK6 577 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 SLC25A24Q6NUK1 477 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 SH2D5Q6ZV89 423 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 FAM13CQ8NE31 585 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 RNF145Q96MT1 663 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 LDB2O43679 373 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 RECQL5O94762 991 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 EBLN1P0CF75 366 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GNPDA1P46926 289 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ERVK-8P63133 956 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 IRF8Q02556 426 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 USP4Q13107 963 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PARGQ86W56 976 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 AGAP2Q99490 1192 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 RC3H2Q9HBD1 1191 aaKnown RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 IL21Q9HBE4 155 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PRDM4Q9UKN5 801 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PSMD13Q9UNM6 376 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ENTPD4Q9Y227 616 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 OAS3Q9Y6K5 1087 aaKnown RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 J3KR12 359 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 SGTAO43765 313 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 C7P10643 843 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 PIK3R1P27986 724 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 CLCQ05315 142 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 KLC1Q07866 573 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 DLG1Q12959 904 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 FASTKQ14296 549 aaKnown RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 HDDC3Q8N4P3 179 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 COL26A1Q96A83 441 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 SPAG4Q9NPE6 437 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 AP3D1O14617 1153 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 TBX18O95935 607 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 DNTTP04053 509 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GSTM2P28161 218 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 HTR1BP28222 390 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ACVRL1P37023 503 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ZNHIT3Q15649 155 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 DLG2Q15700 870 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ZNF697Q5TEC3 545 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GDPD4Q6W3E5 623 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 FERD3LQ96RJ6 166 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 MYCBPQ99417 103 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 MAGEL2Q9UJ55 1249 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 TSPAN6O43657 245 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GMFGO60234 142 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 SLC25A12O75746 678 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ZNF682O95780 498 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 ATXN1LP0C7T5 689 aaKnown RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 CSKP41240 450 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 GSTM5P46439 218 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 CCNHP51946 323 aaPredicted RBP8.11□□□□□ -1.11
PTPN3-201ENST00000262539 CES3Q6UWW8 571 aa8.11□□□□□ -1.11
PTPN3-201ENST00000262539 TTC7BQ86TV6 843 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms