RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NSMCE2Q96MF7 247 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 SEZ6LQ9BYH1 1024 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 BACE2Q9Y5Z0 518 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 EFEMP2O95967 443 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 GLUD1P00367 558 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 CNPP09543 421 aaKnown RBP21.3■■□□□ 1
SH2D3A-201ENST00000245908 CDH1P12830 882 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 JAK1P23458 1154 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 MAGEA10P43363 369 aaPredicted RBP21.3■■□□□ 1
SH2D3A-201ENST00000245908 CD97P48960 835 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 TCTN1Q2MV58 587 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 GLYATQ6IB77 296 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 ABRAXAS1Q6UWZ7 409 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 GPR141Q7Z602 305 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 PATL1Q86TB9 770 aaKnown RBP21.3■■□□□ 1
SH2D3A-201ENST00000245908 CROCCP3Q8IVE0 287 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 RIMKLAQ8IXN7 391 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 CGREF1Q99674 301 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 CHID1Q9BWS9 393 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 TMEM165Q9HC07 324 aa21.3■■□□□ 1
SH2D3A-201ENST00000245908 AFF4Q9UHB7 1163 aaKnown RBP21.3■■□□□ 1
SH2D3A-201ENST00000245908 FCF1Q9Y324 198 aaKnown RBP21.3■■□□□ 1
SH2D3A-201ENST00000245908 POLR3HQ9Y535 204 aaPredicted RBP21.3■■□□□ 1
SH2D3A-201ENST00000245908 ANAPC1Q9H1A4 1944 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 C2orf78A6NCI8 922 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 H0Y626 953 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 ZNF7P17097 686 aaPredicted RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 CTPS1P17812 591 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 ESRRGP62508 458 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 ZBED5Q49AG3 693 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 HABP4Q5JVS0 413 aaKnown RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 ATXN7L2Q5T6C5 722 aaPredicted RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 PTRHD1Q6GMV3 140 aaKnown RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 SERPINA9Q86WD7 417 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 CARNMT1Q8N4J0 409 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 CCDC97Q96F63 343 aaPredicted RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 MYO19Q96H55 970 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 SEPHS2Q99611 448 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 FEM1AQ9BSK4 669 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 CLPBQ9H078 707 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 PIF1Q9H611 641 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 FAIMQ9NVQ4 179 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 TSR3Q9UJK0 312 aaKnown RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 OR51B4Q9Y5P0 310 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 GAPDHSO14556 408 aaPredicted RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 TBL1XO60907 577 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 VARSP26640 1264 aaKnown RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 PWP1Q13610 501 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 SELPLGQ14242 412 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 ABRAXAS2Q15018 415 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 AP5B1Q2VPB7 878 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 ARMC12Q5T9G4 340 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 KLHL35Q6PF15 583 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 USP51Q70EK9 711 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 RALGPS2Q86X27 583 aaPredicted RBP21.29■■□□□ 1
SH2D3A-201ENST00000245908 PIH1D2Q8WWB5 315 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 PPM1MQ96MI6 270 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 HBEGFQ99075 208 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 BDH2Q9BUT1 245 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 CIPCQ9C0C6 399 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 IPPKQ9H8X2 491 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 WDR37Q9Y2I8 494 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 CCL27Q9Y4X3 112 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 NEUROG3Q9Y4Z2 214 aa21.29■■□□□ 1
SH2D3A-201ENST00000245908 ZNF106Q9H2Y7 1883 aaKnown RBP21.28■■□□□ 1
SH2D3A-201ENST00000245908 TULP3O75386 442 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 PGLSO95336 258 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 MT-ND1P03886 318 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 ALPIP09923 528 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 MSH3P20585 1137 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 HMOX2P30519 316 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 KIAA0040Q15053 153 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 PYCR3Q53H96 274 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 DTWD1Q8N5C7 304 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 MAGEE2Q8TD90 523 aaPredicted RBP21.28■■□□□ 1
SH2D3A-201ENST00000245908 VPS50Q96JG6 964 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 PPP3R2Q96LZ3 170 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 RNF145Q96MT1 663 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 VPS51Q9UID3 782 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 GNPTGQ9UJJ9 305 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 PAIP2BQ9ULR5 123 aaKnown RBP21.28■■□□□ 1
SH2D3A-201ENST00000245908 OARD1Q9Y530 152 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 SCN8AQ9UQD0 1980 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 TET1Q8NFU7 2136 aa21.28■■□□□ 1
SH2D3A-201ENST00000245908 HTTP42858 3142 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 ZNF701M0R085 212 aaPredicted RBP21.27■■□□□ 1
SH2D3A-201ENST00000245908 TAPBPO15533 448 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 KATNA1O75449 491 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 RSL1D1O76021 490 aaKnown RBP21.27■■□□□ 1
SH2D3A-201ENST00000245908 SEC24DO94855 1032 aaPredicted RBP21.27■■□□□ 1
SH2D3A-201ENST00000245908 PRAMEF1O95521 474 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 CLIC3O95833 236 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 RGS4P49798 205 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 MTPNP58546 118 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 AP1S1P61966 158 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 ADARB1P78563 741 aaKnown RBP21.27■■□□□ 1
SH2D3A-201ENST00000245908 SP3Q02447 781 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 PLD1Q13393 1074 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 BFSP2Q13515 415 aa21.27■■□□□ 1
SH2D3A-201ENST00000245908 CRY1Q16526 586 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms