RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 SLC9B2Q86UD5 537 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 RCBTB1Q8NDN9 531 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 OR6P1Q8NGX9 317 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 WDR48Q8TAF3 677 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 RSC1A1Q92681 617 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 LRRC45Q96CN5 670 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 SLC46A1Q96NT5 459 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 KRT12Q99456 494 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 ZCCHC2Q9C0B9 1178 aaKnown RBP13.42□□□□□ -0.26
VEGFA-201ENST00000230480 POLR1BQ9H9Y6 1135 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 FAM8A1Q9UBU6 413 aa13.42□□□□□ -0.26
VEGFA-201ENST00000230480 GOLGA6L10A0A0M3HER8 536 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 PDZK1P1A8MUH7 402 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 CDRT15L2A8MXV6 281 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 CCDC188H7C350 402 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 AGRPO00253 132 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 KIF1CO43896 1103 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 GPC4O75487 556 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 AP2A2O94973 939 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 S1PR4O95977 384 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 C9P02748 559 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 MTHFD1P11586 935 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 ITIH1P19827 911 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 GABRB3P28472 473 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 NSG1P42857 185 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 RPL21P46778 160 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 LEPRP48357 1165 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 GFERP55789 205 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 TIAL1Q01085 375 aaKnown RBP eCLIP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 DHX9Q08211 1270 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 C2orf54Q08AI8 447 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 C3orf38Q5JPI3 329 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 IZUMO3Q5VZ72 239 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 TMEM71Q6P5X7 295 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 ZNF549Q6P9A3 640 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 KRT222Q8N1A0 295 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 BMPERQ8N8U9 685 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 PHC3Q8NDX5 983 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 OR4D9Q8NGE8 314 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 HM13Q8TCT9 377 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 GRK7Q8WTQ7 553 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 HEXDCQ8WVB3 486 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 ZCCHC14Q8WYQ9 949 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 LPGAT1Q92604 370 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 DCUN1D1Q96GG9 259 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 CCDC74BQ96LY2 380 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 CCDC86Q9H6F5 360 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 SYNDIG1Q9H7V2 258 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 XAB2Q9HCS7 855 aaKnown RBP13.41□□□□□ -0.26
VEGFA-201ENST00000230480 CATSPERZQ9NTU4 200 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 POT1Q9NUX5 634 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 GRHL1Q9NZI5 618 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 RAXQ9Y2V3 346 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 PCDHGA8Q9Y5G5 932 aa13.41□□□□□ -0.26
VEGFA-201ENST00000230480 MN1Q10571 1320 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-201ENST00000230480 MGAQ8IWI9 3026 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 ANKRD12Q6UB98 2062 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 CCDC187A0A096LP49 1063 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 RAD51CO43502 376 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 SEC31AO94979 1220 aaKnown RBP13.4□□□□□ -0.26
VEGFA-201ENST00000230480 GAS8O95995 478 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 FGF3P11487 239 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-201ENST00000230480 TYRP1P17643 537 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 CASQ1P31415 396 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 EPHA4P54764 986 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 GABREP78334 506 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 PRAMEP78395 509 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 GPLD1P80108 840 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 DR1Q01658 176 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 GRB7Q14451 532 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 PPP1R7Q15435 360 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 CLPPQ16740 277 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-201ENST00000230480 ARMC3Q5W041 872 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 WDR74Q6RFH5 385 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-201ENST00000230480 CERS6Q6ZMG9 384 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 PIM3Q86V86 326 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 HOOK3Q86VS8 718 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 DENND6AQ8IWF6 608 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 GRAMD1AQ96CP6 724 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 PPM1MQ96MI6 270 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 SLC38A3Q99624 504 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 SPRY4Q9C004 299 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 OCIAD1Q9NX40 245 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 SEMA5BQ9P283 1151 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 ACSL5Q9ULC5 683 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 SNX24Q9Y343 169 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 FAM169AQ9Y6X4 670 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 CFAP47Q6ZTR5 3102 aa13.4□□□□□ -0.26
VEGFA-201ENST00000230480 C9orf172C9J069 976 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 AP3B1O00203 1094 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 VIPP01282 170 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 ITGB6P18564 788 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 RPS3P23396 243 aaKnown RBP eCLIP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 AOAHP28039 575 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 ITGA8P53708 1063 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms