RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Slc25a27Q9D6D0 322 aa20.54■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 DmtnQ9WV69 405 aa20.54■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 CenpeQ6RT24 2474 aaKnown RBP20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Ighg3A0A1Y7VJN6 399 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Ttll9A2APC3 461 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Pou5f1P20263 352 aaKnown RBP20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 H2afxP27661 143 aaKnown RBP20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Actr1aP61164 376 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Skap2Q3UND0 358 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Marveld2Q3UZP0 555 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Birc2Q62210 612 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 GnasQ6R0H7 1133 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 HhatQ8BMT9 499 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Adgrg1Q8K209 687 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Actr1bQ8R5C5 376 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Mospd1Q8VEL0 213 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Olfr1Q8VGI1 314 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Zfp65Q91W94 390 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Adcy4Q91WF3 1077 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Pik3cgQ9JHG7 1102 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Smad9Q9JIW5 430 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Tacc3Q9JJ11 631 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Sdk2Q6V4S5 2176 aa20.53■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Bfsp1A2AMT1 669 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Fam155bA2BDP1 471 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Avpr2O88721 371 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Pias1O88907 651 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Fcgr3P08508 261 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 RxraP28700 467 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Asgr1P34927 284 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Scg3P47867 471 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Slc10a2P70172 348 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 StimateQ3UF25 288 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 ADGRF3Q58Y75 991 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Abcd2Q61285 741 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Fastkd5Q7TMV3 762 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Ldoc1Q7TPY9 151 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Olfr533Q7TRT7 320 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Lrrtm4Q80XG9 590 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Vipas39Q8BGQ1 491 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Lsm14bQ8CGC4 385 aaKnown RBP20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Olfr347Q8VGK2 312 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Erlin1Q91X78 346 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Pcdha6Q91Y14 946 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Clcn2Q9R0A1 908 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Ap4b1Q9WV76 738 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Gipc2Q9Z2H7 314 aa20.52■□□□□ 0.88
Ssbp4-201ENSMUST00000049908 Mcf2A2AEU1 1111 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Grin3aA2AIR5 1135 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Zfp599E9PWP1 548 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Arl9F7BE40 171 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 5830473C10RikF8VQ07 620 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Syngr1O55100 234 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tnfrsf17O88472 185 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dync1i1O88485 628 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 IkbkgO88522 412 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Defa-rs7P50715 91 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gucy2eP52785 1108 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ubtfl1Q3USZ2 394 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Prkaa1Q5EG47 559 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Kiaa0754Q69ZZ9 979 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Exoc3l4Q6DIA2 721 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Olfr1344Q7TQV3 321 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tyw1Q8BJM7 721 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Lats1Q8BYR2 1129 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Lrrc19Q8BZT5 364 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Olfr615Q8VGY4 313 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Msantd3Q9CR78 275 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gbe1Q9D6Y9 702 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Rnf32Q9JIT1 368 aa20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Myo18aQ9JMH9 2050 aaKnown RBP20.51■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gm43796A0A0J9YV32 372 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Slfn3A0A1L1STQ7 640 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Gm382B1AXN3 1250 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Pnldc1B2RXZ1 531 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Vmn1r76F8VQ63 324 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Crabp2P22935 138 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Msh2P43247 935 aaKnown RBP20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Cav1P49817 178 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Rnf224Q3UIW8 156 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Brsk2Q69Z98 735 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Klhl5Q6PFE1 708 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Nemp1Q6ZQE4 437 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Pknox2Q8BG99 474 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mospd3Q8BGG6 235 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tgif2lx2Q8K5B9 231 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Vmn1r87Q8R255 295 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 MgarpQ8VI64 283 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ucn3Q924A4 164 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Mrm1Q99J25 320 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Wdr73Q9CWR1 371 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 ApmapQ9D7N9 415 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Ndst3Q9EQH7 873 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Slc13a1Q9JHI4 594 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Opn4Q9QXZ9 521 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Smok2bQ9QYZ3 484 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Smok2aQ9QYZ6 504 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Tbc1d25A1A5B6 742 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Lrriq4A6H6A4 596 aa20.5■□□□□ 0.87
Ssbp4-201ENSMUST00000049908 Dnajc21E9Q8D0 531 aa20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms