RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LEPRP48357 1165 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 CLCN5P51795 746 aa13□□□□□ -0.33
MSH6-214ENST00000616033 AFF1P51825 1210 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 SLC10A7Q0GE19 358 aa13□□□□□ -0.33
MSH6-214ENST00000616033 NKG7Q16617 165 aa13□□□□□ -0.33
MSH6-214ENST00000616033 CEP78Q5JTW2 689 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SNAP47Q5SQN1 464 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SDHAF4Q5VUM1 108 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
MSH6-214ENST00000616033 CILP2Q8IUL8 1156 aa13□□□□□ -0.33
MSH6-214ENST00000616033 ARMC8Q8IUR7 673 aa13□□□□□ -0.33
MSH6-214ENST00000616033 UBE2J2Q8N2K1 259 aa13□□□□□ -0.33
MSH6-214ENST00000616033 PAF1Q8N7H5 531 aa13□□□□□ -0.33
MSH6-214ENST00000616033 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SLC47A1Q96FL8 570 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TUBA1CQ9BQE3 449 aa13□□□□□ -0.33
MSH6-214ENST00000616033 BEX2Q9BXY8 128 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TRIT1Q9H3H1 467 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 RERGLQ9H628 205 aa13□□□□□ -0.33
MSH6-214ENST00000616033 MAGEE1Q9HCI5 957 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SDR39U1Q9NRG7 319 aaPredicted RBP13□□□□□ -0.33
MSH6-214ENST00000616033 C14orf119Q9NWQ9 140 aa13□□□□□ -0.33
MSH6-214ENST00000616033 COMMD8Q9NX08 183 aa13□□□□□ -0.33
MSH6-214ENST00000616033 UXTQ9UBK9 157 aaPredicted RBP13□□□□□ -0.33
MSH6-214ENST00000616033 UBQLN1Q9UMX0 589 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 C19orf81C9J6K1 198 aa13□□□□□ -0.33
MSH6-214ENST00000616033 H0Y626 953 aa13□□□□□ -0.33
MSH6-214ENST00000616033 FAM20BO75063 409 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TRIM16O95361 564 aa13□□□□□ -0.33
MSH6-214ENST00000616033 PTGR1Q14914 329 aa13□□□□□ -0.33
MSH6-214ENST00000616033 ANKS6Q68DC2 871 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SDE2Q6IQ49 451 aa13□□□□□ -0.33
MSH6-214ENST00000616033 C8orf82Q6P1X6 216 aaPredicted RBP13□□□□□ -0.33
MSH6-214ENST00000616033 CIR1Q86X95 450 aaPredicted RBP13□□□□□ -0.33
MSH6-214ENST00000616033 APOBEC3FQ8IUX4 373 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 CRYBG2Q8N1P7 616 aa13□□□□□ -0.33
MSH6-214ENST00000616033 OR2T12Q8NG77 320 aa13□□□□□ -0.33
MSH6-214ENST00000616033 OR52B6Q8NGF0 335 aa13□□□□□ -0.33
MSH6-214ENST00000616033 OR2T11Q8NH01 316 aa13□□□□□ -0.33
MSH6-214ENST00000616033 CDC26Q8NHZ8 85 aa13□□□□□ -0.33
MSH6-214ENST00000616033 FKBP10Q96AY3 582 aa13□□□□□ -0.33
MSH6-214ENST00000616033 ITPKCQ96DU7 683 aa13□□□□□ -0.33
MSH6-214ENST00000616033 EXOC2Q96KP1 924 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SMOQ99835 787 aa13□□□□□ -0.33
MSH6-214ENST00000616033 IRF2BPLQ9H1B7 796 aa13□□□□□ -0.33
MSH6-214ENST00000616033 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TRMT13Q9NUP7 481 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 GMIPQ9P107 970 aa13□□□□□ -0.33
MSH6-214ENST00000616033 PMF1-BGLAPU3KQ54 211 aa13□□□□□ -0.33
MSH6-214ENST00000616033 CASTOR2A6NHX0 329 aa13□□□□□ -0.33
MSH6-214ENST00000616033 BCKDKO14874 412 aa13□□□□□ -0.33
MSH6-214ENST00000616033 TSPAN9O75954 239 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SLC2A3P11169 496 aa13□□□□□ -0.33
MSH6-214ENST00000616033 CDH1P12830 882 aa13□□□□□ -0.33
MSH6-214ENST00000616033 HTR6P50406 440 aa13□□□□□ -0.33
MSH6-214ENST00000616033 FXNQ16595 210 aa13□□□□□ -0.33
MSH6-214ENST00000616033 DESI1Q6ICB0 168 aa13□□□□□ -0.33
MSH6-214ENST00000616033 USP51Q70EK9 711 aa13□□□□□ -0.33
MSH6-214ENST00000616033 CELF2-AS1Q8N7Q2 184 aa13□□□□□ -0.33
MSH6-214ENST00000616033 METTL6Q8TCB7 284 aa13□□□□□ -0.33
MSH6-214ENST00000616033 FCRL2Q96LA5 508 aaPredicted RBP13□□□□□ -0.33
MSH6-214ENST00000616033 VAT1Q99536 393 aa13□□□□□ -0.33
MSH6-214ENST00000616033 BARD1Q99728 777 aaKnown RBP13□□□□□ -0.33
MSH6-214ENST00000616033 TRIM54Q9BYV2 358 aa13□□□□□ -0.33
MSH6-214ENST00000616033 ASB1Q9Y576 335 aa13□□□□□ -0.33
MSH6-214ENST00000616033 SSX4O60224 188 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 PAGE1O75459 146 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 MT-ND2P03891 347 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 SLC2A4P14672 509 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 TGM1P22735 817 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 HOXA11P31270 313 aaPredicted RBP12.99□□□□□ -0.33
MSH6-214ENST00000616033 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 HACD2Q6Y1H2 254 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 BPHLQ86WA6 291 aaPredicted RBP12.99□□□□□ -0.33
MSH6-214ENST00000616033 PDPRQ8NCN5 879 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 PNPT1Q8TCS8 783 aaKnown RBP12.99□□□□□ -0.33
MSH6-214ENST00000616033 ATL1Q8WXF7 558 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 NEK6Q9HC98 313 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 CRTAC1Q9NQ79 661 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 ANKMY1Q9P2S6 941 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 GPR45Q9Y5Y3 372 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
MSH6-214ENST00000616033 hCG_2039718K7EN88 272 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 PRMT5O14744 637 aaPredicted RBP12.99□□□□□ -0.33
MSH6-214ENST00000616033 IDH3BO43837 385 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 SCO1O75880 301 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 GLP2RO95838 553 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 RAP2AP10114 183 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 CD1DP15813 335 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 CD36P16671 472 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 CD40LGP29965 261 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 PRKG2Q13237 762 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 KIAA0930Q6ICG6 404 aaPredicted RBP12.99□□□□□ -0.33
MSH6-214ENST00000616033 LRRC3Q9BY71 257 aa12.99□□□□□ -0.33
MSH6-214ENST00000616033 AKIP1Q9NQ31 210 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms