RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZNF486Q96H40 463 aaPredicted RBP21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 ULBP1Q9BZM6 244 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 CHRAC1Q9NRG0 131 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 DKK3Q9UBP4 350 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 PCDHGA11Q9Y5H2 935 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 INSL5Q9Y5Q6 135 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 ILVBLA1L0T0 632 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 NDUFB5O43674 189 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 PRSS23O95084 383 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 KRT75O95678 551 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 THRBP10828 461 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 TCEA1P23193 301 aaKnown RBP21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 NMBRP28336 390 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 CD40LGP29965 261 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 MAGEA11P43364 429 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 RPL34P49207 117 aaKnown RBP21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 TUFMP49411 452 aaKnown RBP21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 ARSFP54793 590 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 ECT2LQ008S8 904 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 CDH17Q12864 832 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 DUSP6Q16828 381 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 PGS1Q32NB8 556 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 ATAD3BQ5T9A4 648 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 PROSER1Q86XN7 944 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 TCEAL8Q8IYN2 117 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 MIER2Q8N344 545 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 VN1R2Q8NFZ6 395 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 VAT1Q99536 393 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 OMDQ99983 421 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 MAGEB5Q9BZ81 275 aa21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.66■■□□□ 1.06
POLR2J3-220ENST00000613744 TMEM265A0A087WTH1 108 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 NR5A2O00482 541 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 USP12O75317 370 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 F7P08709 466 aaPredicted RBP21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 RBP1P09455 135 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 ATXN1P54253 815 aaKnown RBP21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 PHC1P78364 1004 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 IFITM2Q01629 132 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 POU4F1Q01851 419 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 NAPEPLDQ6IQ20 393 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 HEXDCQ8WVB3 486 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC30A3Q99726 388 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 NSUN3Q9H649 340 aaKnown RBP21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 PDE10AQ9Y233 779 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 FIS1Q9Y3D6 152 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 PCDHGB1Q9Y5G3 927 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 MTCH2Q9Y6C9 303 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 DGKBQ9Y6T7 804 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 LINC01565O15544 149 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 RCVRNP35243 200 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 HYAL1Q12794 435 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 POLD3Q15054 466 aaPredicted RBP21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 FXNQ16595 210 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 HIST2H2ACQ16777 129 aaPredicted RBP21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 FAM83EQ2M2I3 478 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC22A16Q86VW1 577 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 CEP97Q8IW35 865 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 PDZD8Q8NEN9 1154 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 OR7A2PQ8NGA2 310 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 TMEM125Q96AQ2 219 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 TESMINQ9Y4I5 508 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 UGT2A1Q9Y4X1 527 aa21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 SPTBN5Q9NRC6 3674 aaKnown RBP21.65■■□□□ 1.06
POLR2J3-220ENST00000613744 PRUNE2Q8WUY3 3088 aa21.64■■□□□ 1.06
POLR2J3-220ENST00000613744 A8MT66 165 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 CCL16O15467 120 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 TULP3O75386 442 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 PPP5CP53041 499 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 OLIG2Q13516 323 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 DNASE1L3Q13609 305 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 ACOX1Q15067 660 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 C6orf141Q5SZD1 244 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 PIWIL3Q7Z3Z3 882 aaKnown RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 PYROXD2Q8N2H3 581 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 C12orf76Q8N812 135 aaPredicted RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 C19orf60Q96EN9 201 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 C8orf48Q96LL4 319 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 ASB2Q96Q27 587 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 FEM1AQ9BSK4 669 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 MLPHQ9BV36 600 aaPredicted RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 ADNPQ9H2P0 1102 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 SOX17Q9H6I2 414 aaPredicted RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 B4GAT1O43505 415 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 NDUFS2O75306 463 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 GSNP06396 782 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 ALDOCP09972 364 aaKnown RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 BMP4P12644 408 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 BMP1P13497 986 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 NOS2P35228 1153 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 MRPL19P49406 292 aaKnown RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 GSK3BP49841 420 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 KIF19Q2TAC6 998 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 RAB41Q5JT25 222 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 AGAP9Q5VTM2 703 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 PRR23CQ6ZRP0 262 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 PRSS48Q7RTY5 328 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 CCDC117Q8IWD4 279 aaPredicted RBP21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 KLHDC8BQ8IXV7 354 aa21.64■■□□□ 1.05
POLR2J3-220ENST00000613744 APOL5Q9BWW9 433 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms