RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 DHX35Q9H5Z1 703 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HMG20AQ9NP66 347 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 C20orf96Q9NUD7 363 aaPredicted RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 KCNK4Q9NYG8 393 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TMEM9Q9P0T7 183 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 IPO11Q9UI26 975 aaKnown RBP6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 TESMINQ9Y4I5 508 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 HES2Q9Y543 173 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 SBF1O95248 1867 aa6.63□□□□□ -1.35
CDKAL1-204ENST00000613575 OTOFQ9HC10 1997 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 RAB19A4D1S5 217 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 CACNB4O00305 520 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 COPEO14579 308 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 GMDSO60547 372 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 HUS1O60921 280 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 LILRB5O75023 590 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 NDUFS2O75306 463 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 SNNO75324 88 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 DEAF1O75398 565 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 CRTAPO75718 401 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 NADKO95544 446 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 GSRP00390 522 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 EDN3P14138 238 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ITGB6P18564 788 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 AKAP5P24588 427 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ADRA1BP35368 520 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 PGM1P36871 562 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ARL4AP40617 200 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 RECQLP46063 649 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ATXN1P54253 815 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 AQP4P55087 323 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ACTR3P61158 418 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TSPAN5P62079 268 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 RPL10AP62906 217 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 BNC1Q01954 994 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 UBE3AQ05086 875 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 SEMA3BQ13214 749 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ZBED5Q49AG3 693 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TAF1BQ53T94 588 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 SFT2D3Q587I9 215 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 KRBOX4Q5JUW0 171 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 PIK3R6Q5UE93 754 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 OTUD1Q5VV17 481 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 RSBN1Q5VWQ0 802 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ATG16L1Q676U5 607 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 PDPK2PQ6A1A2 396 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 HEATR6Q6AI08 1181 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 KYAT3Q6YP21 454 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 FKBP9P1Q75LS8 142 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 MTDHQ86UE4 582 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 HORMAD1Q86X24 394 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 HERC6Q8IVU3 1022 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 KLHDC8BQ8IXV7 354 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 SCML4Q8N228 414 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TMEM86AQ8N2M4 240 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 LIX1Q8N485 282 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TAB3Q8N5C8 712 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 CCDC185Q8N715 623 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 B3GALNT2Q8NCR0 500 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF540Q8NDQ6 660 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 GSTCDQ8NEC7 633 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TSPAN14Q8NG11 270 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 OR52K1Q8NGK4 314 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 CLEC4CQ8WTT0 213 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 DNAJB3Q8WWF6 145 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 S100ZQ8WXG8 99 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 KLHL6Q8WZ60 621 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 FIG4Q92562 907 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 JADE3Q92613 823 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ISOC1Q96CN7 298 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 PTCD3Q96EY7 689 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 P2RY11Q96G91 374 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ZC3H10Q96K80 434 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TEKT5Q96M29 485 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 FAM111AQ96PZ2 611 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF347Q96SE7 839 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 KLF6Q99612 283 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 MIPEPQ99797 713 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 SEC22CQ9BRL7 303 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 MAGEB5Q9BZ81 275 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 FAM49AQ9H0Q0 323 aaPredicted RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TFB2MQ9H5Q4 396 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 PIF1Q9H611 641 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 NOL6Q9H6R4 1146 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TRIM39Q9HCM9 518 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 RPRD1BQ9NQG5 326 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ARHGEF4Q9NR80 690 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 NPAP1Q9NZP6 1156 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TRMT6Q9UJA5 497 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF221Q9UK13 617 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 FBXO10Q9UK96 956 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 PTBP2Q9UKA9 531 aaKnown RBP6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 SORCS3Q9UPU3 1222 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 ENTPD4Q9Y227 616 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 KCNE2Q9Y6J6 123 aa6.62□□□□□ -1.35
CDKAL1-204ENST00000613575 TRAV20A0A0B4J274 112 aa6.61□□□□□ -1.35
CDKAL1-204ENST00000613575 A8MU76 341 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms