RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SLC41A2Q96JW4 573 aa17.62■□□□□ 0.41
H3F3B-209ENST00000589949 LACRTQ9GZZ8 138 aa17.62■□□□□ 0.41
H3F3B-209ENST00000589949 TRIT1Q9H3H1 467 aaKnown RBP17.62■□□□□ 0.41
H3F3B-209ENST00000589949 AKIRIN1Q9H9L7 192 aaPredicted RBP17.62■□□□□ 0.41
H3F3B-209ENST00000589949 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.62■□□□□ 0.411e-31■■■□□ 15
H3F3B-209ENST00000589949 CROTQ9UKG9 612 aa17.62■□□□□ 0.41
H3F3B-209ENST00000589949 COL12A1Q99715 3063 aa17.62■□□□□ 0.41
H3F3B-209ENST00000589949 GOLGA6L3A6NEY3 463 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 CCL22O00626 93 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 KCNJ13O60928 360 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 SPAG6O75602 509 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 NDUFA10O95299 355 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 MTHFD1P11586 935 aaKnown RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 HALP42357 657 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 GEMP55040 296 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ITGA9Q13797 1035 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 SPARCL1Q14515 664 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 SPA17Q15506 151 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 TAF1AQ15573 450 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 SKIDA1Q1XH10 827 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 TMEM135Q86UB9 458 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 OR13C4Q8NGS5 318 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 CCDC110Q8TBZ0 833 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ZDHHC12Q96GR4 267 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 PPM1MQ96MI6 270 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 CATSPER2Q96P56 530 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 RUFY1Q96T51 708 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 NRTNQ99748 197 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 MAP3K3Q99759 626 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 OSBPL8Q9BZF1 889 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ZCCHC2Q9C0B9 1178 aaKnown RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 WWP1Q9H0M0 922 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 ZNF71Q9NQZ8 489 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 IMP3Q9NV31 184 aaKnown RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 FAM8A1Q9UBU6 413 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 TUBD1Q9UJT1 453 aa17.61■□□□□ 0.41
H3F3B-209ENST00000589949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 EPN1Q9Y6I3 576 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 DNMT3AQ9Y6K1 912 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-209ENST00000589949 MGAT4DA6NG13 374 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 K7EM74 188 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 SRP72O76094 671 aaKnown RBP17.6■□□□□ 0.41
H3F3B-209ENST00000589949 PYGMP11217 842 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 MSH3P20585 1137 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 DLSTP36957 453 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 TNNT3P45378 269 aaPredicted RBP17.6■□□□□ 0.41
H3F3B-209ENST00000589949 EIF3EP60228 445 aaKnown RBP17.6■□□□□ 0.41
H3F3B-209ENST00000589949 COPS2P61201 443 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 TLE1Q04724 770 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 GSE1Q14687 1217 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 COLEC12Q5KU26 742 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 RASGRP3Q8IV61 690 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 LRRC57Q8N9N7 239 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 FAM96AQ9H5X1 160 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 ASB8Q9H765 288 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 LNPEPQ9UIQ6 1025 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 EFR3BQ9Y2G0 817 aa17.6■□□□□ 0.41
H3F3B-209ENST00000589949 A0A0U1RQJ8 604 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 AGAP14A8MT82 685 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 KCNN4O15554 427 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 ANXA9O76027 345 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 EBLN1P0CF75 366 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 RBP3P10745 1247 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 TCN2P20062 427 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 CTNNA2P26232 953 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 AKT1P31749 480 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 PTPN7P35236 360 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 CYLC1P35663 651 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-209ENST00000589949 CDKN1CP49918 316 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-209ENST00000589949 ZNF75DP51815 510 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 ZNF140P52738 457 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-209ENST00000589949 TMPRSS15P98073 1019 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 LONRF2Q1L5Z9 754 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
H3F3B-209ENST00000589949 CRTC2Q53ET0 693 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-209ENST00000589949 CCDC181Q5TID7 509 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 PWWP2BQ6NUJ5 590 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 FBXO38Q6PIJ6 1188 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 KLHDC8BQ8IXV7 354 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 OR2L2Q8NH16 312 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 ABHD17AQ96GS6 310 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 RMDN2Q96LZ7 410 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 PANX2Q96RD6 677 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 EFHD1Q9BUP0 239 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 EPN3Q9H201 632 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 KCNMB2Q9Y691 235 aa17.59■□□□□ 0.41
H3F3B-209ENST00000589949 HECTD1Q9ULT8 2610 aa17.58■□□□□ 0.41
H3F3B-209ENST00000589949 GRID2IPA4D2P6 1211 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 OR5K3A6NET4 321 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 C5orf60A6NFR6 353 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 ARCN1P48444 511 aaKnown RBP17.58■□□□□ 0.4
H3F3B-209ENST00000589949 TUBB3Q13509 450 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 ERV3-1Q14264 604 aa17.58■□□□□ 0.4
H3F3B-209ENST00000589949 ZNF658BQ4V348 819 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms