RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 CNDP2Q96KP4 475 aaKnown RBP13.77□□□□□ -0.21
GGA3-216ENST00000583282 ARHGEF17Q96PE2 2063 aaPredicted RBP13.77□□□□□ -0.21
GGA3-216ENST00000583282 TCF12Q99081 682 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 CCM2Q9BSQ5 444 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 PRDM8Q9NQV8 689 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 SPATS2LQ9NUQ6 558 aaKnown RBP13.77□□□□□ -0.21
GGA3-216ENST00000583282 MOCS1Q9NZB8 636 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 TXNDC16Q9P2K2 825 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 PCDHB1Q9Y5F3 818 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 CABIN1Q9Y6J0 2220 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 CSNK1G3Q9Y6M4 447 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 BPTFQ12830 3046 aa13.77□□□□□ -0.21
GGA3-216ENST00000583282 TRBV23OR9-2A0A075B6M9 112 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 MGAT4DA6NG13 374 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 FAM159BA6NKW6 160 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 F8W8V4 182 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 ESR1P03372 595 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 SLC35G4P0C7Q5 338 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 PKMP14618 531 aaKnown RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 GABRB3P28472 473 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 TUBB4BP68371 445 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 TMED2Q15363 201 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 UAP1Q16222 522 aaPredicted RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 RSPO4Q2I0M5 234 aaPredicted RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 ZCCHC8Q6NZY4 707 aaKnown RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 DUS1LQ6P1R4 473 aaKnown RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 KIAA0408Q6ZU52 694 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 RELL1Q8IUW5 271 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 CFAP206Q8IYR0 622 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 OR2L2Q8NH16 312 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 LINC00615Q96LM1 132 aaPredicted RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 APOLD1Q96LR9 279 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 BIRC8Q96P09 236 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 PANX3Q96QZ0 392 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 WWP1Q9H0M0 922 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 RIF1Q5UIP0 2472 aaKnown RBP13.76□□□□□ -0.21
GGA3-216ENST00000583282 DNAH14Q0VDD8 3507 aa13.76□□□□□ -0.21
GGA3-216ENST00000583282 OR52A4PA6NMU1 304 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 TPP1O14773 563 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 SLC30A4O14863 429 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 NOBOXO60393 691 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 CHRM3P20309 590 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 SAT1P21673 171 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 IDSP22304 550 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 CCR7P32248 378 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 CLCNKAP51800 687 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 DMPKQ09013 629 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 DNAJC3Q13217 504 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 BIRC2Q13490 618 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 NR0B2Q15466 257 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 ZNF549Q6P9A3 640 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 XKR5Q6UX68 686 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 PIM3Q86V86 326 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 SLC26A11Q86WA9 606 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 NAGSQ8N159 534 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 SIDT2Q8NBJ9 832 aaKnown RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 SLC37A2Q8TED4 501 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 UBLCP1Q8WVY7 318 aaPredicted RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 ELMO2Q96JJ3 720 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 RMDN2Q96LZ7 410 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 NSMCE4AQ9NXX6 385 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 SCHIP1Q9P0W5 487 aaPredicted RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 WDR37Q9Y2I8 494 aa13.75□□□□□ -0.21
GGA3-216ENST00000583282 CFAP20Q9Y6A4 193 aaKnown RBP13.75□□□□□ -0.21
GGA3-216ENST00000583282 FAM95CA0A1B0GW59 222 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 A6NCN8 305 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 PRR19A6NJB7 356 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 H3BMM5 538 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 RIPK2O43353 540 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 FAM155BO75949 473 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 LDOC1O95751 146 aaPredicted RBP13.74□□□□□ -0.21
GGA3-216ENST00000583282 C1QAP02745 245 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 AHSGP02765 367 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 F3P13726 295 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 GP5P40197 560 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 HALP42357 657 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
GGA3-216ENST00000583282 PGGT1BP53609 377 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 HSPA14Q0VDF9 509 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 PROX2Q3B8N5 592 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 C14orf28Q4W4Y0 310 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 WDR93Q6P2C0 686 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 GUSBP11Q6P575 273 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 LVRNQ6Q4G3 990 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 TRMT10CQ7L0Y3 403 aaKnown RBP13.74□□□□□ -0.21
GGA3-216ENST00000583282 OTOAQ7RTW8 1153 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 ZC3HC1Q86WB0 502 aaKnown RBP13.74□□□□□ -0.21
GGA3-216ENST00000583282 ZNF761Q86XN6 746 aaPredicted RBP13.74□□□□□ -0.21
GGA3-216ENST00000583282 TRIM48Q8IWZ4 208 aa13.74□□□□□ -0.21
GGA3-216ENST00000583282 SDR16C5Q8N3Y7 309 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms