RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 VPS39Q96JC1 886 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 LINC00615Q96LM1 132 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR2M4Q96R27 311 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CYTH2Q99418 400 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PAFAH2Q99487 392 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 NDNQ99608 321 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GPR22Q99680 433 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CPNE1Q99829 537 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 TIMM29Q9BSF4 260 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 AARSD1Q9BTE6 412 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CLPBQ9H078 707 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 RHOJQ9H4E5 214 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 RMI1Q9H9A7 625 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 ERVMER34-1Q9H9K5 563 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CARS2Q9HA77 564 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 IL21RQ9HBE5 538 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CYP4F12Q9HCS2 524 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 TM7SF3Q9NS93 570 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 NSMCE4AQ9NXX6 385 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 EURLQ9NYK6 297 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC23A2Q9UGH3 650 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 APOBEC3BQ9UH17 382 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GNPTGQ9UJJ9 305 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 GMEB2Q9UKD1 530 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CORO1CQ9ULV4 474 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC6A14Q9UN76 642 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 CRYL1Q9Y2S2 319 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PLEKHM1Q9Y4G2 1056 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PCDHB1Q9Y5F3 818 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 RALGAPA1Q6GYQ0 2036 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 MUC6Q6W4X9 2439 aa6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 COL5A1P20908 1838 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-210ENST00000560834 PI4KAP42356 2102 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 A0A1B0GTQ1 180 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 EXOC1LA0A1B0GW35 172 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 FAM95CA0A1B0GW59 222 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 HMX2A2RU54 273 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 A6NCN8 305 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 QSOX1O00391 747 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 KMOO15229 486 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 SDC3O75056 442 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 LRP3O75074 770 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ERLIN1O75477 346 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PIAS2O75928 621 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 WISP3O95389 354 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ESR1P03372 595 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR56A5P0C7T3 313 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 RALBP11234 206 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ACP5P13686 325 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PKMP14618 531 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ENGP17813 658 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 FDXRP22570 491 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 EPHA8P29322 1005 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PBLDP30039 288 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 FMO4P31512 558 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 CCR7P32248 378 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PPARGP37231 505 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 RXRGP48443 463 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 RPIAP49247 311 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 CSRP3P50461 194 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PGGT1BP53609 377 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 CDKN2DP55273 166 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 IRX4P78413 519 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 IL9RQ01113 521 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PPARDQ03181 441 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 DMPKQ09013 629 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 GBX1Q14549 363 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 SF3A2Q15428 464 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 TCEA2Q15560 299 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PRAMEF14Q5SWL7 426 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 HECTD2Q5U5R9 776 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 FAM45BPQ6NSW5 357 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 TMEM220Q6QAJ8 160 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 FAM83HQ6ZRV2 1179 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 VASH1Q7L8A9 365 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ASCL5Q7RTU5 278 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 PIM3Q86V86 326 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 NRROSQ86YC3 692 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 HID1Q8IV36 788 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 LILRA3Q8N6C8 439 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF548Q8NEK5 533 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 OR2W6PQ8NHA6 318 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 CCL4L1Q8NHW4 92 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 FAM45AQ8TCE6 357 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 HM13Q8TCT9 377 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 EPS8L3Q8TE67 593 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 KCNJ9Q92806 393 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 SKA1Q96BD8 255 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZNF514Q96K75 400 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 TTC1Q99614 292 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 SLC30A3Q99726 388 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 OLFM1Q99784 485 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 NUSAP1Q9BXS6 441 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 ZDHHC5Q9C0B5 715 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 TMEM168Q9H0V1 697 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 COG4Q9H9E3 785 aa6.91□□□□□ -1.3
CTDSPL2-210ENST00000560834 UCKL1Q9NWZ5 548 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms