RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PPIL6Q8IXY8 311 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 CACTIN-AS1Q8N1I8 211 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 MCUQ8NE86 351 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 OR2L2Q8NH16 312 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 SLCO2A1Q92959 643 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 SIGLEC10Q96LC7 697 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 EPB41L5Q9HCM4 733 aa13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 SARS2Q9NP81 518 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 GCN1Q92616 2671 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-205ENST00000558745 WDFY3Q8IZQ1 3526 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 OR5K4A6NMS3 321 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 IQCF5A8MTL0 148 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 D6RAR5 112 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 AP3B1O00203 1094 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 CD3EAPO15446 510 aaKnown RBP13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 TCEA3O75764 348 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 VCLP18206 1134 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 PDHA2P29803 388 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 CSF2RBP32927 897 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 PREPP48147 710 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 DMPKQ09013 629 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 RPE65Q16518 533 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 MSS51Q4VC12 460 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 C3orf38Q5JPI3 329 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 HP1BP3Q5SSJ5 553 aaPredicted RBP13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 AGAP9Q5VTM2 703 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 TRIM48Q8IWZ4 208 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 RCBTB1Q8NDN9 531 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 GPR150Q8NGU9 434 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 HEXDCQ8WVB3 486 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 ZNF514Q96K75 400 aaPredicted RBP13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 LINC00615Q96LM1 132 aaPredicted RBP13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 NRTNQ99748 197 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 CCM2Q9BSQ5 444 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 CATSPERZQ9NTU4 200 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 SATB2Q9UPW6 733 aa13.55□□□□□ -0.24
TSPAN3-205ENST00000558745 BPTFQ12830 3046 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SRRM3A6NNA2 597 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 CCDC188H7C350 402 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 KCNJ13O60928 360 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 MLNP12872 115 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SLC2A4P14672 509 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 TYRP1P17643 537 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 NSG1P42857 185 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 GPR3P46089 330 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ARCN1P48444 511 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 CSE1LP55060 971 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 INHBCP55103 352 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ITIH4Q14624 930 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ZNF658BQ4V348 819 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SNAP47Q5SQN1 464 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 WASH2PQ6VEQ5 465 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 PIM3Q86V86 326 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 IGDCC3Q8IVU1 814 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 UNC5BQ8IZJ1 945 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SPATA4Q8NEY3 305 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 WDR48Q8TAF3 677 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 LKAAEAR1Q8TD35 194 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ZCCHC14Q8WYQ9 949 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 NCSTNQ92542 709 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ZNF669Q96BR6 464 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 CXorf40BQ96DE9 158 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 PRR11Q96HE9 360 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 RMDN2Q96LZ7 410 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 CCDC86Q9H6F5 360 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SLC40A1Q9NP59 571 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 WASH6PQ9NQA3 447 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 IMP3Q9NV31 184 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 RNF14Q9UBS8 474 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 ANAPC5Q9UJX4 755 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 SNX24Q9Y343 169 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
TSPAN3-205ENST00000558745 IGHV5-10-1A0A0J9YXX1 117 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 A8MU76 341 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 BRINP1O60477 761 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 CPNE6O95741 557 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 HALP42357 657 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 MAGEA3P43357 314 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 ITGA8P53708 1063 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 GABREP78334 506 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 GPR18Q14330 331 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 C16orf72Q14CZ0 275 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 RTP5Q14D33 572 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 OTUD6BQ8N6M0 293 aa13.53□□□□□ -0.24
TSPAN3-205ENST00000558745 PHC3Q8NDX5 983 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms