RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 TMEM220Q6QAJ8 160 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 CEACAM20Q6UY09 585 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 DET1Q7L5Y6 550 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 ZNF605Q86T29 641 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 AMZ2Q86W34 360 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 PLXDC1Q8IUK5 500 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 TRIM48Q8IWZ4 208 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 NLGN4YQ8NFZ3 816 aaPredicted RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 GDAP1Q8TB36 358 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 SLC35B2Q8TB61 432 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 KLHL6Q8WZ60 621 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 SLC45A3Q96JT2 553 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 SLC41A2Q96JW4 573 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 DNAJC1Q96KC8 554 aaKnown RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 TBL1YQ9BQ87 522 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 ZCCHC2Q9C0B9 1178 aaKnown RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 RAB33BQ9H082 229 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 ARNT2Q9HBZ2 717 aa12.18□□□□□ -0.46
GCN1-204ENST00000548132 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
GCN1-204ENST00000548132 CFAP20Q9Y6A4 193 aaKnown RBP12.18□□□□□ -0.46
GCN1-204ENST00000548132 STX7O15400 261 aaKnown RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 TOX3O15405 576 aaPredicted RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 LPOP22079 712 aaPredicted RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 AKT1P31749 480 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 SEPHS1P49903 392 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 CDKN1CP49918 316 aaPredicted RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 LAMB3Q13751 1172 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 MAP7Q14244 749 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 METRNLQ641Q3 311 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 FAM92BQ6ZTR7 304 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 RBM12BQ8IXT5 1001 aaKnown RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 NXPE1Q8N323 547 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 IL22RA1Q8N6P7 574 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 BRSK1Q8TDC3 778 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 STARD8Q92502 1023 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 CXorf40BQ96DE9 158 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 LINC00615Q96LM1 132 aaPredicted RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 PPM1MQ96MI6 270 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 INSM2Q96T92 566 aaPredicted RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 ANP32EQ9BTT0 268 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 WWP1Q9H0M0 922 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 LUC7LQ9NQ29 371 aaKnown RBP12.17□□□□□ -0.46
GCN1-204ENST00000548132 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.17□□□□□ -0.46
GCN1-204ENST00000548132 PKP3Q9Y446 797 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 PCDHB11Q9Y5F2 797 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 MED13Q9UHV7 2174 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 COL12A1Q99715 3063 aa12.17□□□□□ -0.46
GCN1-204ENST00000548132 OR5K3A6NET4 321 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 C5orf60A6NFR6 353 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 J3QKU1 62 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 NKX2-8O15522 239 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 FURINP09958 794 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 FGF5P12034 268 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 NELFEP18615 380 aaKnown RBP12.16□□□□□ -0.46
GCN1-204ENST00000548132 PSMA3P25788 255 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 PPM1FP49593 454 aaPredicted RBP12.16□□□□□ -0.46
GCN1-204ENST00000548132 ABHD18Q0P651 414 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 KCNAB1Q14722 419 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 IRGCQ6NXR0 463 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 PIANPQ8IYJ0 282 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 OR2L2Q8NH16 312 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 ZNF398Q8TD17 642 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 HES6Q96HZ4 224 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 CALR3Q96L12 384 aaKnown RBP12.16□□□□□ -0.46
GCN1-204ENST00000548132 OR6C1Q96RD1 312 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 RUFY1Q96T51 708 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 ZPBPQ9BS86 351 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 TRIM4Q9C037 500 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 ASB8Q9H765 288 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 IMP3Q9NV31 184 aaKnown RBP12.16□□□□□ -0.46
GCN1-204ENST00000548132 PIH1D1Q9NWS0 290 aaKnown RBP12.16□□□□□ -0.46
GCN1-204ENST00000548132 FAM8A1Q9UBU6 413 aa12.16□□□□□ -0.46
GCN1-204ENST00000548132 UTP20O75691 2785 aaKnown RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 MGAT4DA6NG13 374 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 ZNF891A8MT65 544 aaPredicted RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 H7C0S8 307 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 POLR1CO15160 346 aaPredicted RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 SLC28A2O43868 658 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 KIAA0754O94854 1291 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 EBLN1P0CF75 366 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 PRKAR1AP10644 381 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 FOLR1P15328 257 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 VCLP18206 1134 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 CDC25BP30305 580 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 HALP42357 657 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 POLE2P56282 527 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 TMPRSS15P98073 1019 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 OASLQ15646 514 aaKnown RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 LONRF2Q1L5Z9 754 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 CCDC181Q5TID7 509 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 CACHD1Q5VU97 1274 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 CAPRIN2Q6IMN6 1127 aaKnown RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 DARS2Q6PI48 645 aaKnown RBP12.15□□□□□ -0.46
GCN1-204ENST00000548132 FAM71DQ8N9W8 422 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 GALNT6Q8NCL4 622 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 HM13Q8TCT9 377 aa12.15□□□□□ -0.46
GCN1-204ENST00000548132 C12orf66Q96MD2 445 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms