RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SMOXQ9NWM0 555 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 ZSCAN32Q9NX65 697 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC60-204ENST00000539847 SELENONQ9NZV5 590 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 FBXW11Q9UKB1 542 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 CA14Q9ULX7 337 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 MRPS17Q9Y2R5 130 aaKnown RBP7.59□□□□□ -1.19
CCDC60-204ENST00000539847 PRG3Q9Y2Y8 225 aaPredicted RBP7.59□□□□□ -1.19
CCDC60-204ENST00000539847 VWA7Q9Y334 891 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 IPPQ9Y573 584 aa7.59□□□□□ -1.19
CCDC60-204ENST00000539847 KMT2BQ9UMN6 2715 aaPredicted RBP7.59□□□□□ -1.19
CCDC60-204ENST00000539847 CHD8Q9HCK8 2581 aa7.59□□□□□ -1.2
CCDC60-204ENST00000539847 C2orf16Q68DN1 1984 aa7.59□□□□□ -1.2
CCDC60-204ENST00000539847 CNOT1A5YKK6 2376 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 DHRS12A0PJE2 317 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF839A8K0R7 811 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 KCNU1A8MYU2 1149 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CLDN25C9JDP6 229 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 STX16-NPEPL1H3BU86 382 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 BOLA2-SMG1P6H3BVE0 249 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PLOD2O00469 737 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 SOCS2O14508 198 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LAMTOR5O43504 91 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 FOXD2O60548 495 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 TSPAN1O60635 241 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 MRPS14O60783 128 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LILRB5O75023 590 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LRP3O75074 770 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 ADAM23O75077 832 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 HPRP00739 348 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 DCNP07585 359 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF24P17028 368 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PSMA4P25789 261 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GSTM2P28161 218 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 MATKP42679 507 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 ARCN1P48444 511 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 EEFSECP57772 596 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GABARAPL2P60520 117 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 RAB10P61026 200 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CTBSQ01459 385 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 OCA2Q04671 838 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 TNK2Q07912 1038 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CDH17Q12864 832 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PMS2P3Q13401 168 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PRPSAP1Q14558 356 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 USP10Q14694 798 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 MLF2Q15773 248 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GOLGA7BQ2TAP0 167 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 SLC25A52Q3SY17 297 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 AGKQ53H12 422 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PPP6R3Q5H9R7 873 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 AARS2Q5JTZ9 985 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PCID2Q5JVF3 399 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 AGAP7PQ5VUJ5 663 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 BROXQ5VW32 411 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 NAPEPLDQ6IQ20 393 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LRRC8EQ6NSJ5 796 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 KCTD8Q6ZWB6 473 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LARP4Q71RC2 724 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 TAS1R1Q7RTX1 841 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PID1Q7Z2X4 250 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LACC1Q8IV20 430 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 FSTL5Q8N475 847 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CBR4Q8N4T8 237 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PIK3C3Q8NEB9 887 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 ZSCAN18Q8TBC5 510 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 USP33Q8TEY7 942 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CHAC2Q8WUX2 184 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 OSCP1Q8WVF1 389 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CANT1Q8WVQ1 401 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 NTAN1Q96AB6 310 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PPWD1Q96BP3 646 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF669Q96BR6 464 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 NSUN5Q96P11 429 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 HHIPQ96QV1 700 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 FERD3LQ96RJ6 166 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GAD1Q99259 594 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CIB1Q99828 191 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 TTPALQ9BTX7 342 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CDT1Q9H211 546 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 NANOGQ9H9S0 305 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 POLR1BQ9H9Y6 1135 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 LIN28AQ9H9Z2 209 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 HMG20AQ9NP66 347 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 PRMT8Q9NR22 394 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GPATCH2LQ9NWQ4 482 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 SMPD3Q9NY59 655 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 GDE1Q9NZC3 331 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 SPATA7Q9P0W8 599 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 CDC14AQ9UNH5 594 aa7.58□□□□□ -1.2
CCDC60-204ENST00000539847 TDRKHQ9Y2W6 561 aaKnown RBP7.58□□□□□ -1.2
CCDC60-204ENST00000539847 RNF103-CHMP3A0A140T963 221 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 A0A1B0GTW7 788 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 MYOCOSA0A1B0GUC4 107 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 ISPDA4D126 451 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 K7EPI3 171 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 DCLK1O15075 740 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 ECI2O75521 394 aa7.57□□□□□ -1.2
CCDC60-204ENST00000539847 PRSS23O95084 383 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms