RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 UBAP1Q9NZ09 502 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 IGSF9Q9P2J2 1179 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CDH7Q9ULB5 785 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 PAIP2BQ9ULR5 123 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 SCN8AQ9UQD0 1980 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CBX4O00257 560 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CHADO15335 359 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 KDELR3O43731 214 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CACNG3O60359 315 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 MAN1A2O60476 641 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 USP12O75317 370 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 UBXN7O94888 489 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 S1PR4O95977 384 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 APRTP07741 180 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 HOXB8P17481 243 aaPredicted RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NCF2P19878 526 aaPredicted RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 ITPKAP23677 461 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 RPL10P27635 214 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 OXCT1P55809 520 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NAA20P61599 178 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 DSC2Q02487 901 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CAV1Q03135 178 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NIPAL4Q0D2K0 466 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 BST1Q10588 318 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 C16orf72Q14CZ0 275 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 PDCD1Q15116 288 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CNN3Q15417 329 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 HIF1AQ16665 826 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TRMT5Q32P41 509 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 KCTD11Q693B1 232 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TIGD7Q6NT04 549 aaPredicted RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 KLC3Q6P597 504 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CENPUQ71F23 418 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NET1Q7Z628 596 aaPredicted RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 ZNF554Q86TJ5 538 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 IGDCC3Q8IVU1 814 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 MPP5Q8N3R9 675 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NAT16Q8N8M0 369 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 OR8H1Q8NGG4 311 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 BPIFB1Q8TDL5 484 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 OSCP1Q8WVF1 389 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NANOS1Q8WY41 292 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CHFRQ96EP1 664 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CFAP36Q96G28 342 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 GUCD1Q96NT3 240 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CATSPER2Q96P56 530 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 BBS2Q9BXC9 721 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TRPV4Q9HBA0 871 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 NT5MQ9NPB1 228 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 HPS4Q9NQG7 708 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 ACSS2Q9NR19 701 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 ABCB8Q9NUT2 735 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 RBM22Q9NW64 420 aaKnown RBP eCLIP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 DUS2Q9NX74 493 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 GDE1Q9NZC3 331 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 VPS51Q9UID3 782 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 SHOC2Q9UQ13 582 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TCF20Q9UGU0 1960 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 A0A088AWK7 358 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 ANTXRLA6NF34 631 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 FAM227AF5H4B4 570 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TMX2-CTNND1H3BSU7 103 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 K7ERQ8 282 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 HNRNPCL1O60812 293 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 SMIM18P0DKX4 95 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 JUPP14923 745 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CD1EP15812 388 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 C5AR1P21730 350 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 GMPRP36959 345 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 GPR3P46089 330 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CNGA3Q16281 694 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 KBTBD12Q3ZCT8 623 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 MPP7Q5T2T1 576 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 VWA5B1Q5TIE3 1220 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TMEM215Q68D42 235 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 PTAR1Q7Z6K3 402 aaPredicted RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 CEP97Q8IW35 865 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 SFTPA1Q8IWL2 248 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 KLHDC8BQ8IXV7 354 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 GAB3Q8WWW8 586 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 SUSD6Q92537 303 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 FATE1Q969F0 183 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 PLPPR2Q96GM1 343 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 PLAC1Q9HBJ0 212 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 GLOD4Q9HC38 313 aa6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 RPL26L1Q9UNX3 145 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 RBMX2Q9Y388 322 aaKnown RBP6.04□□□□□ -1.44
PDZRN4-203ENST00000539469 TYW5A2RUC4 315 aaKnown RBP6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 ANKRD34BA5PLL1 514 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 SMAD6O43541 496 aaKnown RBP6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 CCDC166P0CW27 439 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 LAMP2P13473 410 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 TCN1P20061 433 aaPredicted RBP6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 TPSB2P20231 275 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 ADSLP30566 484 aaPredicted RBP6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 SLC5A2P31639 672 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 FDFT1P37268 417 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 MAGEA3P43357 314 aa6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 STK19P49842 368 aaPredicted RBP6.03□□□□□ -1.44
PDZRN4-203ENST00000539469 RAP1GDS1P52306 607 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms