RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SLC29A2Q14542 456 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 TMED2Q15363 201 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 INAVAQ3KP66 663 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 EMBQ6PCB8 327 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 FAM83HQ6ZRV2 1179 aaPredicted RBP17.15■□□□□ 0.34
NXF1-216ENST00000533499 C11orf96Q7Z7L8 435 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 SLC26A11Q86WA9 606 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 NRROSQ86YC3 692 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 HM13Q8TCT9 377 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 GPBAR1Q8TDU6 330 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 RHBDD1Q8TEB9 315 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 ELMO2Q96JJ3 720 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 BIRC8Q96P09 236 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 CPNE1Q99829 537 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 TXLNGYQ9BZA5 131 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 ACSS3Q9H6R3 686 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 PRDM8Q9NQV8 689 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
NXF1-216ENST00000533499 RAB21Q9UL25 225 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 ST14Q9Y5Y6 855 aa17.15■□□□□ 0.34
NXF1-216ENST00000533499 DNMT3AQ9Y6K1 912 aaPredicted RBP17.15■□□□□ 0.34
NXF1-216ENST00000533499 PCDHGA12O60330 932 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 VPS26AO75436 327 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 ERLIN1O75477 346 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 APOA4P06727 396 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 ZNF883P0CG24 379 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 GP5P40197 560 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 PREPP48147 710 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 HSPA14Q0VDF9 509 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 RBM20Q5T481 1227 aaKnown RBP17.14■□□□□ 0.33
NXF1-216ENST00000533499 ZNF549Q6P9A3 640 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 CYS1Q717R9 158 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 OTOAQ7RTW8 1153 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 LILRA3Q8N6C8 439 aaPredicted RBP17.14■□□□□ 0.33
NXF1-216ENST00000533499 OR2L2Q8NH16 312 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 ZDHHC1Q8WTX9 485 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 SKA2Q8WVK7 121 aaPredicted RBP17.14■□□□□ 0.33
NXF1-216ENST00000533499 AARSD1Q9BTE6 412 aaKnown RBP17.14■□□□□ 0.33
NXF1-216ENST00000533499 COG4Q9H9E3 785 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 TBC1D29Q9UFV1 150 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 BTBD3Q9Y2F9 522 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 CSNK1G3Q9Y6M4 447 aa17.14■□□□□ 0.33
NXF1-216ENST00000533499 ASCC3Q8N3C0 2202 aaKnown RBP17.14■□□□□ 0.33
NXF1-216ENST00000533499 ARHGEF17Q96PE2 2063 aaPredicted RBP17.13■□□□□ 0.33
NXF1-216ENST00000533499 FAM95CA0A1B0GW59 222 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 KCNJ13O60928 360 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 INHBAP08476 426 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 MYF5P13349 255 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 MSH2P43246 934 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 CLCNKAP51800 687 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 SLC12A2P55011 1212 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 NAB1Q13506 487 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 HECTD2Q5U5R9 776 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 ALYREFQ86V81 257 aaKnown RBP17.13■□□□□ 0.33
NXF1-216ENST00000533499 ZC3HC1Q86WB0 502 aaKnown RBP17.13■□□□□ 0.33
NXF1-216ENST00000533499 SFTPA2Q8IWL1 248 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 SIDT2Q8NBJ9 832 aaKnown RBP17.13■□□□□ 0.33
NXF1-216ENST00000533499 MYRIPQ8NFW9 859 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 TMEM159Q96B96 161 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 VPS39Q96JC1 886 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 LINC00615Q96LM1 132 aaPredicted RBP17.13■□□□□ 0.33
NXF1-216ENST00000533499 GPR21Q99679 349 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 CCDC77Q9BR77 488 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 WWP1Q9H0M0 922 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 PCDHGB2Q9Y5G2 931 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 COMMD10Q9Y6G5 202 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 BPTFQ12830 3046 aa17.13■□□□□ 0.33
NXF1-216ENST00000533499 GOLGA4Q13439 2230 aaKnown RBP17.12■□□□□ 0.33
NXF1-216ENST00000533499 SMIM23A6NLE4 172 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 TRIM38O00635 465 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 FLRT2O43155 660 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 SIGLEC6O43699 453 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 SH3BP5O60239 455 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 ABHD2P08910 425 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 SLC35G4P0C7Q5 338 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 CCR7P32248 378 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 SPRP35270 261 aaPredicted RBP17.12■□□□□ 0.33
NXF1-216ENST00000533499 HSD17B3P37058 310 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 HALP42357 657 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 GRK6P43250 576 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 PPM1FP49593 454 aaPredicted RBP17.12■□□□□ 0.33
NXF1-216ENST00000533499 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
NXF1-216ENST00000533499 DAB2P98082 770 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 KANSL1Q7Z3B3 1105 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 SPNS2Q8IVW8 549 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 TRIM48Q8IWZ4 208 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 SDR16C5Q8N3Y7 309 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 ZBTB2Q8N680 514 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 PATE1Q8WXA2 126 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 RBBP8Q99708 897 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 DUSP23Q9BVJ7 150 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 NLGN3Q9NZ94 848 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 GALPQ9UBC7 116 aa17.12■□□□□ 0.33
NXF1-216ENST00000533499 TRMT6Q9UJA5 497 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms