RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 HACD3Q9P035 362 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 ATXN10Q9UBB4 475 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 TBC1D29Q9UFV1 150 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 SHOC2Q9UQ13 582 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PCDHA3Q9Y5H8 950 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 PCYT1BQ9Y5K3 369 aaPredicted RBP10.34□□□□□ -0.75
CPSF1-203ENST00000527916 TACC2O95359 2948 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 MTORP42345 2549 aa10.34□□□□□ -0.75
CPSF1-203ENST00000527916 APOC4-APOC2K7ER74 178 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 VEGFDO43915 354 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 PMPCBO75439 489 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 IPO7O95373 1038 aaKnown RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 APOC2P02655 101 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 F3P13726 295 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF8P17098 575 aaPredicted RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 BPIP17213 487 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 CTNNA1P35221 906 aaKnown RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 PTPN7P35236 360 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 WNT3AP56704 352 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 MPP3Q13368 585 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ELOAQ14241 798 aaKnown RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 PRR30Q53SZ7 412 aaPredicted RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ZRANB3Q5FWF4 1079 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 KDELC1Q6UW63 502 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 B4GALNT4Q76KP1 1039 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ADGRG6Q86SQ4 1221 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ZC3H18Q86VM9 953 aaKnown RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 PPP1R3BQ86XI6 285 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF567Q8N184 647 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 BRSK1Q8TDC3 778 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 CT55Q8WUE5 264 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 KRT35Q92764 455 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 QKIQ96PU8 341 aaKnown RBP eCLIP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 ING2Q9H160 280 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 RBSNQ9H1K0 784 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 GOLPH3Q9H4A6 298 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 RUBCNLQ9H714 662 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 LHX9Q9NQ69 397 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 KLHL8Q9P2G9 620 aaPredicted RBP10.33□□□□□ -0.76
CPSF1-203ENST00000527916 TFR2Q9UP52 801 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 CCDC168Q8NDH2 2452 aa10.33□□□□□ -0.76
CPSF1-203ENST00000527916 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 CCDC66A2RUB6 948 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 GOLGA6L3A6NEY3 463 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 LILRA5A6NI73 299 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 ARGFXA6NJG6 315 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 KMOO15229 486 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PJA2O43164 708 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 KCNJ13O60928 360 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 SPAG6O75602 509 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF189O75820 626 aaPredicted RBP10.32□□□□□ -0.76
CPSF1-203ENST00000527916 RASSF9O75901 435 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 EML2O95834 649 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 C9P02748 559 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PIRTP0C851 137 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 FGF5P12034 268 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 ACP5P13686 325 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 NFKB1P19838 968 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 HLA-DPA1P20036 260 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 CTNNA2P26232 953 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PTPN4P29074 926 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 TNNT3P45378 269 aaPredicted RBP10.32□□□□□ -0.76
CPSF1-203ENST00000527916 SEPHS1P49903 392 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 NOMO1Q15155 1222 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 NR6A1Q15406 480 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 SLC1A5Q15758 541 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 CPZQ66K79 652 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 SYVN1Q86TM6 617 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PHYKPLQ8IUZ5 450 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 CCDC50Q8IVM0 306 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 MARVELD3Q96A59 401 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PNPLA2Q96AD5 504 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 RNF31Q96EP0 1072 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 ELMO2Q96JJ3 720 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 MRGPRX2Q96LB1 330 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 TGM7Q96PF1 710 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 FERMT1Q9BQL6 677 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 TBC1D10AQ9BXI6 508 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 UCK1Q9HA47 277 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PDE7BQ9NP56 450 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 UBP1Q9NZI7 540 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 IL17CQ9P0M4 197 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 LUZP4Q9P127 313 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 CPNE7Q9UBL6 633 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 PRKAB1Q9Y478 270 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 SPO11Q9Y5K1 396 aa10.32□□□□□ -0.76
CPSF1-203ENST00000527916 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 SOWAHDA6NJG2 315 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 AURKAO14965 403 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 SNX2O60749 519 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 ANXA9O76027 345 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 UBXN7O94888 489 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 CDK14O94921 469 aa10.31□□□□□ -0.76
CPSF1-203ENST00000527916 ZNF7P17097 686 aaPredicted RBP10.31□□□□□ -0.76
CPSF1-203ENST00000527916 AMD1P17707 334 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms