RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 MAGEA11P43364 429 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 RPL34P49207 117 aaKnown RBP12.66□□□□□ -0.38
SMAD1-215ENST00000515385 AIF1P55008 147 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 SH3BP2P78314 561 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 RBP5P82980 135 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
SMAD1-215ENST00000515385 TBRG1Q3YBR2 411 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 ARHGAP17Q68EM7 881 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 CAPN13Q6MZZ7 669 aaPredicted RBP12.66□□□□□ -0.38
SMAD1-215ENST00000515385 SPESP1Q6UW49 350 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 RPS27LQ71UM5 84 aaKnown RBP12.66□□□□□ -0.38
SMAD1-215ENST00000515385 SPATC1Q76KD6 591 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 FAM131BQ86XD5 332 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 PLCZ1Q86YW0 608 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 RNF135Q8IUD6 432 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 CADM2Q8N3J6 435 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 RPL3LQ92901 407 aaKnown RBP12.66□□□□□ -0.38
SMAD1-215ENST00000515385 SLC39A13Q96H72 371 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 PDLIM5Q96HC4 596 aaKnown RBP12.66□□□□□ -0.38
SMAD1-215ENST00000515385 TEKT5Q96M29 485 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 APOL2Q9BQE5 337 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 TRIM8Q9BZR9 551 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 MID1IP1Q9NPA3 183 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
SMAD1-215ENST00000515385 IGKV6D-21A0A0A0MT36 114 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 A0A1W2PQ72 361 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 LACTBL1A8MY62 500 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 H3BMM5 538 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 RGS20O76081 388 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 CDK14O94921 469 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 FADS2O95864 444 aaKnown RBP12.65□□□□□ -0.38
SMAD1-215ENST00000515385 PRR35P0CG20 571 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 EFNA1P20827 205 aaPredicted RBP12.65□□□□□ -0.38
SMAD1-215ENST00000515385 ERP29P30040 261 aaKnown RBP12.65□□□□□ -0.38
SMAD1-215ENST00000515385 TIE1P35590 1138 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 HNF4AP41235 474 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 CTSKP43235 329 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 HCAR3P49019 387 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 SULT1E1P49888 294 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 APLP1P51693 650 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 CDH13P55290 713 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 OSTNP61366 133 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 FPGSQ05932 587 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 RAPSNQ13702 412 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 ESCO2Q56NI9 601 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 GALNT7Q86SF2 657 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
SMAD1-215ENST00000515385 SLC22A15Q8IZD6 547 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 ZNF540Q8NDQ6 660 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 OR5H6Q8NGV6 325 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 SLC47A1Q96FL8 570 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 CDADC1Q9BWV3 514 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 TNFSF13BQ9Y275 285 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.38
SMAD1-215ENST00000515385 KRT87PA6NCN2 255 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 OR5K3A6NET4 321 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 KPNA6O60684 536 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 B3GALNT1O75752 331 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 MAGP20916 626 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 DCTP40126 519 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 ZFP36L2P47974 494 aaKnown RBP12.65□□□□□ -0.39
SMAD1-215ENST00000515385 GPLD1P80108 840 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 KYAT1Q16773 422 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 EML3Q32P44 896 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 PARP15Q460N3 678 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 FAM122CQ6P4D5 195 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 CCDC190Q86UF4 302 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 NLGN4XQ8N0W4 816 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 C12orf29Q8N999 325 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 ST13P5Q8NFI4 369 aaPredicted RBP12.65□□□□□ -0.39
SMAD1-215ENST00000515385 OR8J3Q8NGG0 315 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 SLC2A14Q8TDB8 520 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 TBL1YQ9BQ87 522 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 TRAF4Q9BUZ4 470 aaPredicted RBP12.65□□□□□ -0.39
SMAD1-215ENST00000515385 NUSAP1Q9BXS6 441 aaKnown RBP12.65□□□□□ -0.39
SMAD1-215ENST00000515385 ACTR8Q9H981 624 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 LTB4R2Q9NPC1 389 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 RNF6Q9Y252 685 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 PCDHB14Q9Y5E9 798 aa12.65□□□□□ -0.39
SMAD1-215ENST00000515385 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 LINC00854A0A1B0GVQ3 168 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 C12orf71A8MTZ7 269 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 C9JVG2 144 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 ARNTLO00327 626 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 GSTA4O15217 222 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 CACNG3O60359 315 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 FAM20BO75063 409 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 SCELO95171 688 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 RPLP0P05388 317 aaKnown RBP12.64□□□□□ -0.39
SMAD1-215ENST00000515385 DBTP11182 482 aaKnown RBP12.64□□□□□ -0.39
SMAD1-215ENST00000515385 IL1RNP18510 177 aa12.64□□□□□ -0.39
SMAD1-215ENST00000515385 MSH3P20585 1137 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms