RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 GAP43P17677 238 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 HNRNPA2B1P22626 353 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 AKT2P31751 481 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 DRD3P35462 400 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 UBA7P41226 1012 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 AP3M2P53677 418 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC16A1P53985 500 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MLLT10P55197 1068 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MAP3K7CLP57077 242 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SNRPFP62306 86 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 HSD11B2P80365 405 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SRSF2Q01130 221 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SULT2A1Q06520 285 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZFP36L1Q07352 338 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SP140Q13342 867 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 TRPC3Q13507 836 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC12A1Q13621 1099 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 PTPRRQ15256 657 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZRSR1Q15695 479 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 IL17AQ16552 155 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 TMEM119Q4V9L6 283 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 LACTB2Q53H82 288 aaPredicted RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 L1TD1Q5T7N2 865 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 TSTD2Q5T7W7 516 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 GUSBP11Q6P575 273 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 CLEC20AQ6ZU45 233 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SCD5Q86SK9 330 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 PEG10Q86TG7 708 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 GPBP1Q86WP2 473 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZFAND4Q86XD8 727 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZC3H3Q8IXZ2 948 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 CMIPQ8IY22 773 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SYCP3Q8IZU3 236 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF548Q8NEK5 533 aaPredicted RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC2A14Q8TDB8 520 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 TAF4BQ92750 862 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SAAL1Q96ER3 474 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 C8orf76Q96K31 380 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 LMLNQ96KR4 655 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 CGRRF1Q99675 332 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 DDX50Q9BQ39 737 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 DPEP3Q9H4B8 488 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZHX3Q9H4I2 956 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MRPL44Q9H9J2 332 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 EPB41L5Q9HCM4 733 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ANLNQ9NQW6 1124 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ZNF71Q9NQZ8 489 aaPredicted RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 OLFML3Q9NRN5 406 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 AKAP7Q9P0M2 348 aaPredicted RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 SPASTQ9UBP0 616 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 APPL1Q9UKG1 709 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 G3BP2Q9UN86 482 aaKnown RBP3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ERVW-1Q9UQF0 538 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 ENTPD4Q9Y227 616 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 MTORP42345 2549 aa3.71□□□□□ -1.82
PDLIM5-218ENST00000513341 HIVEP3Q5T1R4 2406 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PRAMEF33A0A0G2JMD5 474 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 A0A1W2PQM1 296 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CCDC78A2IDD5 438 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TYW5A2RUC4 315 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 EFCAB7A8K855 629 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 FAM171A2A8MVW0 826 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TTC34A8MYJ7 566 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 D6RAR5 112 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 MKRN2OSH3BPM6 223 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 M0QYT0 321 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 MCF2LO15068 1137 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 MDM4O15151 490 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SLC31A1O15431 190 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ZW10O43264 779 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 JAK2O60674 1132 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PRAMEF10O60809 474 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 EIF5BO60841 1220 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 NEBLO76041 1014 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CLDN1O95832 211 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 LDLRP01130 860 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 RPN1P04843 607 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ALOX15P16050 662 aaPredicted RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TNNI1P19237 187 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 GNLYP22749 145 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 MAT2AP31153 395 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CD70P32970 193 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CSKP41240 450 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 RABIFP47224 123 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 LEPRP48357 1165 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PSMD8P48556 350 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 TOB1P50616 345 aaPredicted RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 BLKP51451 505 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PLK1P53350 603 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ADKP55263 362 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 YPEL5P62699 121 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 CDK17Q00537 523 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ECT2LQ008S8 904 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 MALLQ13021 153 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 SRSF6Q13247 344 aaKnown RBP3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 PTK2BQ14289 1009 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 FGL2Q14314 439 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 FZD2Q14332 565 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ACAP2Q15057 778 aa3.7□□□□□ -1.82
PDLIM5-218ENST00000513341 ADRM1Q16186 407 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms