RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 MMP21Q8N119 569 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 BBS5Q8N3I7 341 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 TTC30BQ8N4P2 665 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 CPT1BQ92523 772 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 CLIP3Q96DZ5 547 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 TRAPPC9Q96Q05 1148 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 ERGIC2Q96RQ1 377 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 CD180Q99467 661 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 TDRD1Q9BXT4 1180 aaKnown RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 PARVAQ9NVD7 372 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 HRASLS2Q9NWW9 162 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
RNF4-218ENST00000513284 MYO6Q9UM54 1294 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 BTRCQ9Y297 605 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 SPG11Q96JI7 2443 aa10.9□□□□□ -0.66
RNF4-218ENST00000513284 ANKHD1Q8IWZ3 2542 aaKnown RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 DOCK10Q96BY6 2186 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 OR5K3A6NET4 321 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 GPR89AB7ZAQ6 455 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 C19orf84I3L1E1 186 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 LDB2O43679 373 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 ALPPP05187 535 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 GPR89BP0CG08 455 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 IL1R2P27930 398 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 HADHAP40939 763 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 TSFMP43897 325 aaKnown RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 ARCN1P48444 511 aaKnown RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 EPHB1P54762 984 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 KCNK10P57789 538 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 MAMLD1Q13495 774 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 ANKRD20A8PQ5CZ79 823 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 BNC2Q6ZN30 1099 aaPredicted RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 FAM83HQ6ZRV2 1179 aaPredicted RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 POLNQ7Z5Q5 900 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 PPP1R32Q7Z5V6 425 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 RAB43Q86YS6 212 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 PSTKQ8IV42 348 aaKnown RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 MCOLN2Q8IZK6 566 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 NSMCE1Q8WV22 266 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 GLYATL1Q969I3 302 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 FER1L6-AS2Q96M78 137 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 WDR77Q9BQA1 342 aaPredicted RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 SPATA16Q9BXB7 569 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 TLR10Q9BXR5 811 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 NAT10Q9H0A0 1025 aaKnown RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 ACTR5Q9H9F9 607 aaPredicted RBP10.89□□□□□ -0.67
RNF4-218ENST00000513284 P4HTMQ9NXG6 502 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 TAS2R14Q9NYV8 317 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 CNTRLQ7Z7A1 2325 aa10.89□□□□□ -0.67
RNF4-218ENST00000513284 ABCA2Q9BZC7 2435 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 SLC9B1P1A6NJY1 282 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 ANKRD66B4E2M5 251 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 PRPSAP2O60256 369 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 JRKO75564 520 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 MTA2O94776 668 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 IPO13O94829 963 aaKnown RBP10.88□□□□□ -0.67
RNF4-218ENST00000513284 MMP2P08253 660 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 COX6B1P14854 86 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 TCF4P15884 667 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 KIR3DL1P43629 444 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 TDGF1P3P51864 188 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 CDH6P55285 790 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 ITKQ08881 620 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 CDSNQ15517 529 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 FILIP1LQ4L180 1135 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 FAM182AQ5T1J6 154 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 ALS2CLQ60I27 953 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 MRGPRGQ86SM5 289 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 CLEC1AQ8NC01 280 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 CATSPER1Q8NEC5 780 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 LPCAT1Q8NF37 534 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 DNAJB14Q8TBM8 379 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 MAML1Q92585 1016 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 TRIM11Q96F44 468 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 ZWILCHQ9H900 591 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 PCDH9Q9HC56 1237 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 CHST11Q9NPF2 352 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 PKD2L2Q9NZM6 624 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 DNPEPQ9ULA0 475 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 PSMD13Q9UNM6 376 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 SCINQ9Y6U3 715 aa10.88□□□□□ -0.67
RNF4-218ENST00000513284 MAP1AP78559 2803 aaPredicted RBP10.88□□□□□ -0.67
RNF4-218ENST00000513284 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 TMEM191CA6NGB0 347 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 LRRC10BA6NIK2 292 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 H3BMH7 237 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 PCDH17O14917 1159 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
RNF4-218ENST00000513284 ZNF749O43361 778 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 VEGFDO43915 354 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 CDK14O94921 469 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 UMODP07911 640 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 CBSLP0DN79 551 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 ATP1A3P13637 1013 aa10.87□□□□□ -0.67
RNF4-218ENST00000513284 CBSP35520 551 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms