RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 RPP40O75818 363 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 CACNB3P54284 484 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 DCDC1P59894 354 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 ZNF367Q7RTV3 350 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 HPS6Q86YV9 775 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 HDDC3Q8N4P3 179 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 FCRL4Q96PJ5 515 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 SLC4A9Q96Q91 983 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 OAZ2O95190 189 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 LINC00032P0C843 101 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 PVALBP20472 110 aaPredicted RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 PPP3R1P63098 170 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 RPL13AP3Q6NVV1 102 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 KLHL36Q8N4N3 616 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 STYXQ8WUJ0 223 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 SLC45A3Q96JT2 553 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 GRHL1Q9NZI5 618 aa8.28□□□□□ -1.08
HTT-208ENST00000510626 OAS3Q9Y6K5 1087 aaKnown RBP8.28□□□□□ -1.08
HTT-208ENST00000510626 BMP6P22004 513 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 CAP2P40123 477 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 ANKRD22Q5VYY1 191 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 EXOC2Q96KP1 924 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 IFT52Q9Y366 437 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 PRKYO43930 277 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 CYP4F2P78329 520 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 CYP4F3Q08477 520 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 USF2Q15853 346 aaPredicted RBP8.27□□□□□ -1.08
HTT-208ENST00000510626 ADGRD2Q7Z7M1 963 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 RNF180Q86T96 592 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 TMEM161BQ8NDZ6 487 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 ELMO3Q96BJ8 720 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 YIPF2Q9BWQ6 316 aa8.27□□□□□ -1.08
HTT-208ENST00000510626 SMCO3A2RU48 225 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SLC25A12O75746 678 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TGFB2P61812 414 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 LRRC52Q8N7C0 313 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SEC14L1Q92503 715 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PPA2Q9H2U2 334 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TFB2MQ9H5Q4 396 aaKnown RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 TMEM27Q9HBJ8 222 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SEC14L3Q9UDX4 400 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 NUP205Q92621 2012 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ACOX3O15254 700 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 FGF19O95750 216 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 NR2C1P13056 603 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SLC18A2Q05940 514 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 FADDQ13158 208 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 HACD2Q6Y1H2 254 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SCUBE3Q8IX30 993 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 FSTL5Q8N475 847 aaPredicted RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 LSM14AQ8ND56 463 aaKnown RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 IFT46Q9NQC8 304 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 C2P06681 752 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ANXA3P12429 323 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CD36P16671 472 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PLK1P53350 603 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 AP5B1Q2VPB7 878 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ZACNQ401N2 412 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ERMP1Q7Z2K6 904 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ZNF614Q8N883 585 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PCSK9Q8NBP7 692 aaKnown RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 DENND6BQ8NEG7 585 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CXCL8P10145 99 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CYP4B1P13584 511 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TIGD2Q4W5G0 525 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TPRG1LQ5T0D9 272 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 OSTF1Q92882 214 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ZNF285Q96NJ3 590 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 IL25Q9H293 177 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CNTN6Q9UQ52 1028 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ZNF780BQ9Y6R6 833 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 E5RJQ4 531 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SCN2BO60939 215 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 FAM91A1Q658Y4 838 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 NAT16Q8N8M0 369 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 OR52K2Q8NGK3 314 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 IFT27Q9BW83 186 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PRDM5Q9NQX1 630 aaPredicted RBP8.27□□□□□ -1.09
HTT-208ENST00000510626 GTF2IRD1Q9UHL9 959 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ATP6AP2A0A1C7CYW4 349 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 ZNF432O94892 652 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CLDN9O95484 217 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 IL1R1P14778 569 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 BACE1P56817 501 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 HMGN3Q15651 99 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CENPSQ8N2Z9 138 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PRAF2O60831 178 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 NTSR2O95665 410 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 CHKAP35790 457 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 KHKP50053 298 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 SELPLGQ14242 412 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 HEPACAMQ14CZ8 416 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 PGM5Q15124 567 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 KLHL35Q6PF15 583 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 MON1BQ7L1V2 547 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TSPAN33Q86UF1 283 aa8.27□□□□□ -1.09
HTT-208ENST00000510626 TKTL2Q9H0I9 626 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms