RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TRAFD1O14545 582 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 MUSKO15146 869 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 TSPAN6O43657 245 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 KDM1AO60341 852 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 NDST3O95803 873 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 IFNB1P01574 187 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CTSLP07711 333 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CTAGE8P0CG41 777 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CYP2A6P11509 494 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 HLA-DPA1P20036 260 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 XPAP23025 273 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CD86P42081 329 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 DPP6P42658 865 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 NEK3P51956 506 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 MAXP61244 160 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SARNPP82979 210 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CDK18Q07002 472 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZBTB17Q13105 803 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SNX1Q13596 522 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 LAMB3Q13751 1172 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 NUMA1Q14980 2115 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 GLE1Q53GS7 698 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ATXN7L2Q5T6C5 722 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 NAPEPLDQ6IQ20 393 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ERAP2Q6P179 960 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 LEKR1Q6ZMV7 388 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ERN2Q76MJ5 926 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 LINC00523Q86TU6 105 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CTAGE6Q86UF2 777 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 LONP2Q86WA8 852 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 MMAAQ8IVH4 418 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CTAGE4Q8IX94 777 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ABCA7Q8IZY2 2146 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZNF366Q8N895 744 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 FAM71DQ8N9W8 422 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 BBOF1Q8ND07 529 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SPATA4Q8NEY3 305 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 MDGA1Q8NFP4 955 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CADM4Q8NFZ8 388 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 HMGB4Q8WW32 186 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ATG4AQ8WYN0 398 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SCRN2Q96FV2 425 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 FEM1CQ96JP0 617 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 LYSMD1Q96S90 227 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SMAD5Q99717 465 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 FOXB1Q99853 325 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 OMDQ99983 421 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 C19orf43Q9BQ61 176 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 AP1M1Q9BXS5 423 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 TDRD1Q9BXT4 1180 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 FRMD8Q9BZ67 464 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC13A1Q9BZW2 595 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 BTBD1Q9H0C5 482 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SEMA4AQ9H3S1 761 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 TRABDQ9H4I3 376 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZDHHC6Q9H6R6 413 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 LRRC40Q9H9A6 602 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ARNT2Q9HBZ2 717 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 NOD2Q9HC29 1040 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 PREBQ9HCU5 417 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 EIF2B3Q9NR50 452 aaKnown RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 C14orf119Q9NWQ9 140 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZSCAN32Q9NX65 697 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 FBXL12Q9NXK8 326 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 HACD3Q9P035 362 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 RSPH14Q9UHP6 348 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 TTLL3Q9Y4R7 772 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 PCDHGA2Q9Y5H1 932 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 RAI2Q9Y5P3 530 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 ACTL7AQ9Y615 435 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 SDK1Q7Z5N4 2213 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 KNL1Q8NG31 2342 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CEP192Q8TEP8 1941 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 PI4KAP42356 2102 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 CACNA1EQ15878 2313 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 MUC6Q6W4X9 2439 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 EML5Q05BV3 1969 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 THADAQ6YHU6 1953 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 LOC285095A0A1B0GVY8 99 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 RGSL1A5PLK6 1076 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 ANTXRLA6NF34 631 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 LRRC72A6NJI9 287 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 C16orf96A6NNT2 1141 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 ANKRD66B4E2M5 251 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 E7EVH7 732 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 PSMD11O00231 422 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 MID1O15344 667 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 PLRG1O43660 514 aaKnown RBP5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 SUN1O94901 812 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 PGLSO95336 258 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 AP2A1O95782 977 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRLP01236 227 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 KRT14P02533 472 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 FGF1P05230 155 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 UGT2B4P06133 528 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 MMP2P08253 660 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 SP9P0CG40 484 aa5.48□□□□□ -1.53
HMGB1P44-201ENST00000508597 TDGF1P13385 188 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms